Difference between revisions of "ICatLinearization"

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=== iCat Linearization ===
 
=== iCat Linearization ===
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== Overview ==
 
== Overview ==
* Linearization in iCat allows the same entity to be a child of two parents, but only counted as a child of one parent for particular purposes.  
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* For example, Bacterial Pneumonia is both an infection and a respiratory disease. The same code can be used to describe this disease, but have different parents depending on whether the same code could be used for a particular disease, but have different parents depending on if it is entered for the purpose of morbidity or for mortality.
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iCAT allows the browsing and editing of the '''ICD-11 Foundation Layer'''. In the Foundation Layer, one category can have '''multiple parents'''. For example, Bacterial Pneumonia is both an infection and a respiratory disease, and therefore can have parents from both of this chapters.
* This directly affects the way in which statistics are aggregated under particular categories. In some cases (say a classification of morbidity) we might want to classify Bacterial Pneumonia as a disease. In that case, all incidents of Bacterial Pneumonia add one count to the tally of all diseases. If we were more interested in infections, then each case of Bacterial Pneumonia would be counted as an infection.
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However, for the purpose of Mortality, Morbidity, or other uses we need to identify only one parent for each of the categories. We call the different uses - Mortality, Morbidity, etc. - '''linearizations''', and their main characteristic is that each category in a linearization has exactly one parent. This is a very important feature for statistical purposes, to make sure that a disease is counted only once when compiling a statistics.
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<div style="background:#F0E6CA; border:1px solid #AE5B08; padding:10px 15px 10px 20px; margin:2em 0 0 0;">
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'''The rule is that the Foundation Layer contains <u>all possible parents</u> of a disease. For a linearization (e.g. Mortality), we need to select from the parents in the Foundation Layer <u>exactly one parent</u> that will be used in that linearization. '''
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</div><br />
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It is also possible to '''skip several levels in a linearization'''. This can be done by selecting one of the ancestors of the parents from the Foundation layer.  
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== Using Linearizations in iCat ==
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1. Go to the '''ICD Content Tab -> Classification Properties'''. To edit, you need to first sign in.
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[[File:WebProtegeLinearizationStep3.png]]
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We can see that ''J15.8 Other bacterial pneumonia'' is part of the Morbidity linearization. To specify that a category is part of a linearization, you need to click the check box for that linearization in the ''Is part of'' column of the ''Use'' table. The red question mark in the second column means that it is not specified, if the category is part of that linearization. A checked mark (like in the first row) indicates that the category is part of the linearization.
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2. To specify that ''J15.8 Other bacterial pneumonia'' is '''part of the Research linearization, click on the check box''' in the 4th row.
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[[File:ICATLinearization_Research.png]]
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3. If the category has multiple parents, you need to '''choose of the parents or ancestor of the parents as the linearization parent'''. To select a linearization parent, click on the cell corresponding to the ''Linerization Parent'' column. You will get a pop-up window, in which you can select the linearization parent.
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[[File:WebProtegeLinearizationStep6.png]]
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You may also '''specify a sorting label''' in the 3rd column, that will be used for sorting the children in a linearization.
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4. The result is that ''J15.8 Other bacterial pneumonia'' is part of the Research linearization and the parent in that linearization is B98.
  
  
[[File:WebProtegeLinearizationHoldingScreenshot.png]]
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[[File:ICATLinearization_parent.png]]

Latest revision as of 16:23, July 15, 2010

iCat Linearization

Overview

iCAT allows the browsing and editing of the ICD-11 Foundation Layer. In the Foundation Layer, one category can have multiple parents. For example, Bacterial Pneumonia is both an infection and a respiratory disease, and therefore can have parents from both of this chapters.

However, for the purpose of Mortality, Morbidity, or other uses we need to identify only one parent for each of the categories. We call the different uses - Mortality, Morbidity, etc. - linearizations, and their main characteristic is that each category in a linearization has exactly one parent. This is a very important feature for statistical purposes, to make sure that a disease is counted only once when compiling a statistics.

The rule is that the Foundation Layer contains all possible parents of a disease. For a linearization (e.g. Mortality), we need to select from the parents in the Foundation Layer exactly one parent that will be used in that linearization.


It is also possible to skip several levels in a linearization. This can be done by selecting one of the ancestors of the parents from the Foundation layer.


Using Linearizations in iCat

1. Go to the ICD Content Tab -> Classification Properties. To edit, you need to first sign in.


WebProtegeLinearizationStep3.png


We can see that J15.8 Other bacterial pneumonia is part of the Morbidity linearization. To specify that a category is part of a linearization, you need to click the check box for that linearization in the Is part of column of the Use table. The red question mark in the second column means that it is not specified, if the category is part of that linearization. A checked mark (like in the first row) indicates that the category is part of the linearization.


2. To specify that J15.8 Other bacterial pneumonia is part of the Research linearization, click on the check box in the 4th row.


ICATLinearization Research.png


3. If the category has multiple parents, you need to choose of the parents or ancestor of the parents as the linearization parent. To select a linearization parent, click on the cell corresponding to the Linerization Parent column. You will get a pop-up window, in which you can select the linearization parent.


WebProtegeLinearizationStep6.png


You may also specify a sorting label in the 3rd column, that will be used for sorting the children in a linearization.


4. The result is that J15.8 Other bacterial pneumonia is part of the Research linearization and the parent in that linearization is B98.


ICATLinearization parent.png