Protege Wiki - User contributions [en]

Form:VersionOfProtege Client-Server

2007-08-29T09:48:49Z

Markus: Form:VersionOfProtege Client/Server moved to Form:VersionOfProtege Client-Server

<noinclude>
This is the 'VersionOfProtege Client-Server' form; edit the page to see the source code. You can add data with this form [[Special:AddPage/Form:VersionOfProtege Client-Server|here]].
</noinclude>
<includeonly>
<h2>Version Of Protege Client-Server: {{{field|page title}}}</h2>

<p>Please provide information about this version of Protege Client-Server in the form below.
<br />
</p>

{{{for template|VersionOfApplication}}}

<table border="0" cellpadding="5" cellspacing="10">
<tr style="background:#e6ffcc;">
<td valign="top" align="right"><strong>Application:</strong></td> <td valign="top">{{{field|VersionOf|default=Protege Client-Server}}}</td>
<td style="background:#ff6666;">DO NOT CHANGE THIS!</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Version number:</strong></td> <td>{{{field|Number}}}</td>
<td style="background:#ff6666;">Number for this version.<br />SHOULD BE THE SAME AS IN PAGE TITLE</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Last update:</strong></td> <td>{{{field|LastUpdate}}}</td>
<td>Date on which this version was released.</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Download URL:</strong></td> <td>{{{field|File}}}</td>
<td>Link to download page.</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Changelog:</strong></td> <td>{{{field|Changelog|default=see page for more details}}}</td>
<td>A short description of changes in this version.</td>
</tr>

</table>

{{{end template}}}

<fieldset><legend>More details</legend>
<p>You can add more information here and use standard MediaWiki formatting options.</p>
{{{field|free text}}}
</fieldset>

</includeonly>

Protege

2007-08-24T06:41:04Z

Markus:

<div style="display:block; float:left; width:100%; margin:0 0 1.5em 0; padding:0;text-align:center;">
<p style="padding:0; margin:0; font-size:1.9em; font-weight:bold; word-spacing:-2px;">
Protege
</p>
<p style="padding:0 ;margin:0;">
by [[Developed by::Stanford Medical Informatics]]
</p>
</div>

<div style="display:block; float:left; width:100%;">
<div class="PluginSidebar"> <p>[[screenshot:=ProtegeLogo.gif|[[Image:ProtegeLogo.gif|thumb|100%|center|Logo]]]]</p>

{| cellspacing="0" cellpadding="5" class="PluginWikiInfoBox"
|-
| class="InfoBoxColFirst" | Developed by: || [[developed by::Stanford Medical Informatics]]
|-
| class="InfoBoxCol" | Last Update: || [[Last update:=07/06/2007]]
|-
| class="InfoBoxCol" | Current Version: || <ask format="template" template="CurrentVersion" limit="1" searchlabel="" sort="version number" order="descending" default="no version available">[[Category:Version]] [[version of::Protege-Frames||Protege-OWL||Protege Client/Server]] [[Version number:=*]]</ask>
|-
| class="InfoBoxCol" | Homepage: || [[Homepage:=http://protege.stanford.edu/|[http://protege.stanford.edu/ Protege Website]]]
|-
| class="InfoBoxCol" | Affiliation: ||
*[[affiliated with::Stanford Medical Informatics]]
*[[affiliated with::Stanford University]]
|}
</div>

<div style="display:block; float:left; width:64%;">
[[Description:=Protege is a free, open source ontology editor and knowledge-base framework. It was developed by Stanford Medical Informatics at the Stanford University School of Medicine.]]

The Protege platform supports two main ways of modeling ontologies via the [[Protege-Frames]] and [[Protege-OWL]] editors. Protege ontologies can be exported into a variety of formats including RDF(S), OWL, and XML Schema.

Protege is based on Java, is extensible, and provides a plug-and-play environment that makes it a flexible base for rapid prototyping and application development.

Protege is supported by a strong community of developers and academic, government and corporate users, who are using Protege for knowledge solutions in areas as diverse as biomedicine, intelligence gathering, and corporate modeling.

</div>

</div>

[[Category:Application]]

Template:Application

2007-08-24T06:38:21Z

Markus:

<includeonly>
<div style="display:block; float:left; width:100%; margin:0 0 1.5em 0; padding:0;text-align:center;">
<p style="padding:0; margin:0; font-size:1.9em; font-weight:bold; word-spacing:-2px;">
{{{ApplicationID}}}
</p>
<p style="padding:0 ;margin:0;">
{{ #if: {{{DevelopedBy1|}}} | by [[Developed by::{{{DevelopedBy1}}}]] }}{{ #if: {{{DevelopedBy2|}}} | , [[Developed by::{{{DevelopedBy2}}}]] }}{{ #if: {{{DevelopedBy3|}}} | , [[Developed by::{{{DevelopedBy3}}}]] }}{{ #if: {{{DevelopedBy4|}}} | , [[Developed by::{{{DevelopedBy4}}}]] }}{{ #if: {{{DevelopedBy5|}}} | , [[Developed by::{{{DevelopedBy5}}}]] }}{{ #if: {{{DevelopedBy6|}}} | , [[Developed by::{{{DevelopedBy6}}}]] }}{{ #if: {{{DevelopedBy7|}}} | , [[Developed by::{{{DevelopedBy7}}}]] }}{{ #if: {{{DevelopedBy8|}}} | , [[Developed by::{{{DevelopedBy8}}}]] }}{{ #if: {{{DevelopedBy9|}}} | , [[Developed by::{{{DevelopedBy9}}}]] }}
</p>
</div>

<div style="display:block;float:left;width:100%;">
<div class="PluginSidebar">{{ #if: {{{Screenshot|}}} | <p>[[screenshot:={{{Screenshot}}}|[[Image:{{{Screenshot}}}|thumb|100%|center|Screenshot]]]]</p> | }}
{| cellspacing="0" cellpadding="5" class="PluginWikiInfoBox"
|-
| class="InfoBoxColFirst" | Last Update: || {{ #if:{{{LastUpdate|}}} | [[Last update:={{{LastUpdate}}}]] | notavailable }}
|-
| class="InfoBoxCol" | Current Version: || <ask format="template" template="CurrentVersion" limit="1" searchlabel="" sort="version number" order="descending" default="no version available">[[Category:Version]] [[version of::{{PAGENAME}}]] [[Version number:=*]]</ask>
|-
| class="InfoBoxCol" | Homepage: || {{ #if:{{{HomepageURL|}}} | [[Homepage:={{{HomepageURL}}}|[{{{HomepageURL}}} {{{ApplicationID}}} Website]]] | not available }}
|-
| class="InfoBoxCol" | Affiliation: || {{ #if:{{{Affiliation1|}}} | *[[Affiliated with::{{{Affiliation1}}}]] | not available }}{{ #if:{{{Affiliation2|}}} | *[[Affiliated with::{{{Affiliation2}}}]] | }}
{{ #if:{{{Affiliation3|}}} | *[[Affiliated with::{{{Affiliation3}}}]] | }}{{ #if:{{{Affiliation4|}}} | *[[Affiliated with::{{{Affiliation4}}}]] | }}{{ #if:{{{Affiliation5|}}} | *[[Affiliated with::{{{Affiliation5}}}]] | }}{{ #if:{{{Affiliation6|}}} | *[[Affiliated with::{{{Affiliation6}}}]] | }}{{ #if:{{{Affiliation7|}}} | *[[Affiliated with::{{{Affiliation7}}}]] | }}{{ #if:{{{Affiliation8|}}} | *[[Affiliated with::{{{Affiliation8}}}]] | }}{{ #if:{{{Affiliation9|}}} | *[[Affiliated with::{{{Affiliation9}}}]] | }}
|}
</div>

<div style="display:block;float:left;width:64%;margin:0 0 2em 0;">
__NOTOC__

[[Description:={{{Description}}}]]

== Plugins for {{PAGENAME}} ==

This section shows available plugins for [[ID:={{{ApplicationID}}}|{{{ApplicationID}}}]] and topics for each of these plugins.

<ask format="broadtable" default="no plugins available">
[[Category:Plugin]] [[for application::{{PAGENAME}}]] [[has topic::*]]
</ask>

<div style="width:100%;display:block;float:left;padding: 10px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:Plugin|New Plugin]]</strong><br /><br /></center>
</div>

== Versions of {{PAGENAME}} ==

This section shows available versions of {{{ApplicationID}}} and changes in each version.

<ask format="broadtable" sort="version number" order="descending" default="no version available for this application">
[[Category:Version]] [[version of::{{PAGENAME}}]]
[[Changelog:=*|Changelog]]
</ask>

<div style="width:100%;display:block;float:left;padding: 10px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:VersionOf{{PAGENAME}}|New {{PAGENAME}} Version]]</strong><br /><br /></center>
</div>

</div>
</div>

[[Category:Application]]

</includeonly><noinclude>
{{{{FULLPAGENAME}}/doc}}
</noinclude>

Template:Application

2007-08-24T06:34:55Z

Markus:

<includeonly>
<div style="display:block; float:left; width:100%; margin:0 0 1.5em 0; padding:0;text-align:center;">
<p style="padding:0; margin:0; font-size:1.9em; font-weight:bold; word-spacing:-2px;">
{{{ApplicationID}}}
</p>
<p style="padding:0 ;margin:0;">
{{ #if: {{{DevelopedBy1|}}} | by [[Developed by::{{{DevelopedBy1}}}]] }}{{ #if: {{{DevelopedBy2|}}} | , [[Developed by::{{{DevelopedBy2}}}]] }}{{ #if: {{{DevelopedBy3|}}} | , [[Developed by::{{{DevelopedBy3}}}]] }}{{ #if: {{{DevelopedBy4|}}} | , [[Developed by::{{{DevelopedBy4}}}]] }}{{ #if: {{{DevelopedBy5|}}} | , [[Developed by::{{{DevelopedBy5}}}]] }}{{ #if: {{{DevelopedBy6|}}} | , [[Developed by::{{{DevelopedBy6}}}]] }}{{ #if: {{{DevelopedBy7|}}} | , [[Developed by::{{{DevelopedBy7}}}]] }}{{ #if: {{{DevelopedBy8|}}} | , [[Developed by::{{{DevelopedBy8}}}]] }}{{ #if: {{{DevelopedBy9|}}} | , [[Developed by::{{{DevelopedBy9}}}]] }}
</p>
</div>

<div style="display:block;float:left;width:100%;">
<div class="PluginSidebar">{{ #if: {{{Screenshot|}}} | <p>[[screenshot:={{{Screenshot}}}|[[Image:{{{Screenshot}}}|thumb|100%|center|Screenshot]]]]</p> | }}
{| cellspacing="0" cellpadding="5" class="PluginWikiInfoBox"
|-
| class="InfoBoxColFirst" | Developed by: || {{ #if:{{{DevelopedBy1|}}} | [[Developed by::{{{DevelopedBy1}}}]] | not available }}
|-
| class="InfoBoxCol" | Last Update: || {{ #if:{{{LastUpdate|}}} | [[Last update:={{{LastUpdate}}}]] | notavailable }}
|-
| class="InfoBoxCol" | Current Version: || <ask format="template" template="CurrentVersion" limit="1" searchlabel="" sort="version number" order="descending" default="no version available">[[Category:Version]] [[version of::{{PAGENAME}}]] [[Version number:=*]]</ask>
|-
| class="InfoBoxCol" | Homepage: || {{ #if:{{{HomepageURL|}}} | [[Homepage:={{{HomepageURL}}}|[{{{HomepageURL}}} {{{ApplicationID}}} Website]]] | not available }}
|-
| class="InfoBoxCol" | Affiliation: || {{ #if:{{{Affiliation1|}}} | *[[Affiliated with::{{{Affiliation1}}}]] | not available }}{{ #if:{{{Affiliation2|}}} | *[[Affiliated with::{{{Affiliation2}}}]] | }}
{{ #if:{{{Affiliation3|}}} | *[[Affiliated with::{{{Affiliation3}}}]] | }}{{ #if:{{{Affiliation4|}}} | *[[Affiliated with::{{{Affiliation4}}}]] | }}{{ #if:{{{Affiliation5|}}} | *[[Affiliated with::{{{Affiliation5}}}]] | }}{{ #if:{{{Affiliation6|}}} | *[[Affiliated with::{{{Affiliation6}}}]] | }}{{ #if:{{{Affiliation7|}}} | *[[Affiliated with::{{{Affiliation7}}}]] | }}{{ #if:{{{Affiliation8|}}} | *[[Affiliated with::{{{Affiliation8}}}]] | }}{{ #if:{{{Affiliation9|}}} | *[[Affiliated with::{{{Affiliation9}}}]] | }}
|}
</div>

<div style="display:block;float:left;width:64%;margin:0 0 2em 0;">
__NOTOC__

[[Description:={{{Description}}}]]

== Plugins for {{PAGENAME}} ==

This section shows available plugins for [[ID:={{{ApplicationID}}}|{{{ApplicationID}}}]] and topics for each of these plugins.

<ask format="broadtable" default="no plugins available">
[[Category:Plugin]] [[for application::{{PAGENAME}}]] [[has topic::*]]
</ask>

<div style="width:100%;display:block;float:left;padding: 10px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:Plugin|New Plugin]]</strong><br /><br /></center>
</div>

== Versions of {{PAGENAME}} ==

This section shows available versions of {{{ApplicationID}}} and changes in each version.

<ask format="broadtable" sort="version number" order="descending" default="no version available for this application">
[[Category:Version]] [[version of::{{PAGENAME}}]]
[[Changelog:=*|Changelog]]
</ask>

<div style="width:100%;display:block;float:left;padding: 10px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:VersionOf{{PAGENAME}}|New {{PAGENAME}} Version]]</strong><br /><br /></center>
</div>

</div>
</div>

[[Category:Application]]

</includeonly><noinclude>
{{{{FULLPAGENAME}}/doc}}
</noinclude>

Template:Application

2007-08-24T06:34:08Z

Markus:

<includeonly>
<div style="display:block; float:left; width:100%; margin:0 0 1.5em 0; padding:0;">
<p style="padding:0; margin:0; font-size:1.9em; font-weight:bold; word-spacing:-2px;">
{{{ApplicationID}}}
</p>
<p style="padding:0 ;margin:0;">
{{ #if: {{{DevelopedBy1|}}} | by [[Developed by::{{{DevelopedBy1}}}]] }}{{ #if: {{{DevelopedBy2|}}} | , [[Developed by::{{{DevelopedBy2}}}]] }}{{ #if: {{{DevelopedBy3|}}} | , [[Developed by::{{{DevelopedBy3}}}]] }}{{ #if: {{{DevelopedBy4|}}} | , [[Developed by::{{{DevelopedBy4}}}]] }}{{ #if: {{{DevelopedBy5|}}} | , [[Developed by::{{{DevelopedBy5}}}]] }}{{ #if: {{{DevelopedBy6|}}} | , [[Developed by::{{{DevelopedBy6}}}]] }}{{ #if: {{{DevelopedBy7|}}} | , [[Developed by::{{{DevelopedBy7}}}]] }}{{ #if: {{{DevelopedBy8|}}} | , [[Developed by::{{{DevelopedBy8}}}]] }}{{ #if: {{{DevelopedBy9|}}} | , [[Developed by::{{{DevelopedBy9}}}]] }}
</p>
</div>

<div style="display:block;float:left;width:100%;">
<div class="PluginSidebar">{{ #if: {{{Screenshot|}}} | <p>[[screenshot:={{{Screenshot}}}|[[Image:{{{Screenshot}}}|thumb|100%|center|Screenshot]]]]</p> | }}
{| cellspacing="0" cellpadding="5" class="PluginWikiInfoBox"
|-
| class="InfoBoxColFirst" | Developed by: || {{ #if:{{{DevelopedBy1|}}} | [[Developed by::{{{DevelopedBy1}}}]] | not available }}
|-
| class="InfoBoxCol" | Last Update: || {{ #if:{{{LastUpdate|}}} | [[Last update:={{{LastUpdate}}}]] | notavailable }}
|-
| class="InfoBoxCol" | Current Version: || <ask format="template" template="CurrentVersion" limit="1" searchlabel="" sort="version number" order="descending" default="no version available">[[Category:Version]] [[version of::{{PAGENAME}}]] [[Version number:=*]]</ask>
|-
| class="InfoBoxCol" | Homepage: || {{ #if:{{{HomepageURL|}}} | [[Homepage:={{{HomepageURL}}}|[{{{HomepageURL}}} {{{ApplicationID}}} Website]]] | not available }}
|-
| class="InfoBoxCol" | Affiliation: || {{ #if:{{{Affiliation1|}}} | *[[Affiliated with::{{{Affiliation1}}}]] | not available }}{{ #if:{{{Affiliation2|}}} | *[[Affiliated with::{{{Affiliation2}}}]] | }}
{{ #if:{{{Affiliation3|}}} | *[[Affiliated with::{{{Affiliation3}}}]] | }}{{ #if:{{{Affiliation4|}}} | *[[Affiliated with::{{{Affiliation4}}}]] | }}{{ #if:{{{Affiliation5|}}} | *[[Affiliated with::{{{Affiliation5}}}]] | }}{{ #if:{{{Affiliation6|}}} | *[[Affiliated with::{{{Affiliation6}}}]] | }}{{ #if:{{{Affiliation7|}}} | *[[Affiliated with::{{{Affiliation7}}}]] | }}{{ #if:{{{Affiliation8|}}} | *[[Affiliated with::{{{Affiliation8}}}]] | }}{{ #if:{{{Affiliation9|}}} | *[[Affiliated with::{{{Affiliation9}}}]] | }}
|}
</div>

<div style="display:block;float:left;width:64%;margin:0 0 2em 0;">
__NOTOC__

[[Description:={{{Description}}}]]

== Plugins for {{PAGENAME}} ==

This section shows available plugins for [[ID:={{{ApplicationID}}}|{{{ApplicationID}}}]] and topics for each of these plugins.

<ask format="broadtable" default="no plugins available">
[[Category:Plugin]] [[for application::{{PAGENAME}}]] [[has topic::*]]
</ask>

<div style="width:100%;display:block;float:left;padding: 10px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:Plugin|New Plugin]]</strong><br /><br /></center>
</div>

== Versions of {{PAGENAME}} ==

This section shows available versions of {{{ApplicationID}}} and changes in each version.

<ask format="broadtable" sort="version number" order="descending" default="no version available for this application">
[[Category:Version]] [[version of::{{PAGENAME}}]]
[[Changelog:=*|Changelog]]
</ask>

<div style="width:100%;display:block;float:left;padding: 10px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:VersionOf{{PAGENAME}}|New {{PAGENAME}} Version]]</strong><br /><br /></center>
</div>

</div>
</div>

[[Category:Application]]

</includeonly><noinclude>
{{{{FULLPAGENAME}}/doc}}
</noinclude>

Property:For application

2007-08-20T19:44:14Z

Markus: New page: {{Relation|Description=This relation should be used to describe which person or organization a plugin or application is affiliated with.}}

{{Relation|Description=This relation should be used to describe which person or organization a plugin or application is affiliated with.}}

Protege

2007-08-20T19:41:44Z

Markus:

{{PluginWikiHeader|ID=Protege|Author1=Stanford Medical Informatics}}
<div style="display:block; float:left; width:100%;">
<div class="PluginSidebar"> <p>[[screenshot:=ProtegeLogo.gif|[[Image:ProtegeLogo.gif|thumb|100%|center|Logo]]]]</p>

{| cellspacing="0" cellpadding="5" class="PluginWikiInfoBox"
|-
| class="InfoBoxColFirst" | Developed by: || [[developed by::Stanford Medical Informatics]]
|-
| class="InfoBoxCol" | Last Update: || [[Last update:=07/06/2007]]
|-
| class="InfoBoxCol" | Current Version: || <ask format="template" template="CurrentVersion" limit="1" searchlabel="" sort="version number" order="descending" default="no version available">[[Category:Version]] [[version of::Protege-Frames||Protege-OWL||Protege Client/Server]] [[Version number:=*]]</ask>
|-
| class="InfoBoxCol" | Homepage: || [[Homepage:=http://protege.stanford.edu/|[http://protege.stanford.edu/ Protege Website]]]
|-
| class="InfoBoxCol" | Affiliation: ||
*[[affiliated with::Stanford Medical Informatics]]
*[[affiliated with::Stanford University]]
|}
</div>

<div style="display:block; float:left; width:64%;">
[[Description:=Protege is a free, open source ontology editor and knowledge-base framework. It was developed by Stanford Medical Informatics at the Stanford University School of Medicine.]]

The Protege platform supports two main ways of modeling ontologies via the [[Protege-Frames]] and [[Protege-OWL]] editors. Protege ontologies can be exported into a variety of formats including RDF(S), OWL, and XML Schema.

There is another flavor of Protege which is called [[Protege Client/Server]]...

Protege is based on Java, is extensible, and provides a plug-and-play environment that makes it a flexible base for rapid prototyping and application development.

Protege is supported by a strong community of developers and academic, government and corporate users, who are using Protege for knowledge solutions in areas as diverse as biomedicine, intelligence gathering, and corporate modeling.

</div>

</div>

[[Category:Application]]

Protege Plugin Library

2007-08-20T19:40:21Z

Markus: /* Welcome to the Protege Plugin Library! */

__NOTOC__
<div style="background:#F0E6CA; border:1px solid #AE5B08; padding:10px 15px 10px 20px; margin:2em 0 0 0;">
=== Welcome to the Protege Plugin Library! ===

The Protege Plugin Library offers a convenient place for the Protege community to find open source and commercial '''[[Protege]]''' plugins that enhance the Protege application.

The plugins on our Wiki were developed either here at Stanford or by our user community, as extensions to the core Protege system, or to the Protege-Frames editor and/or the Protege-OWL editor. Follow individual instructions to download and install the plugins that are of interest to you. We always welcome contributions from our user community. If you have developed software that you think would be of interest to others, please register your plugin and your organization (see the green box on the right-hand side of this page).

It may be of interest to our user community that the Protege Wiki uses the [http://ontoworld.org/wiki/Semantic_MediaWiki Semantic MediaWiki] extension and thus is a true semantic wiki. By using semantic technologies, we are able to provide a knowledge repository and platform for publishing information about Protege plugins as well as intelligent search capabilities for particular plugins and associated organizations.<br />
</div>

<div style="display:block; float:left; width:68%;margin: 2em 0px 0px 0px;">

<div id="topics" style="display:block; float:left;">

==Topics==

Browse plugins by topics of interest.

<ask headers="hide" format="ul" default="No topics yet." sep="">
[[Category:Topic]]
</ask>
</div>

<div id="topics" style="display:block; float:left;">

==Types==

Browse plugins by type.

<ul>
<li>[[:Category:API|API]]</li>
<li>[[:Category:Backend|Backend]]</li>
<li>[[:Category:Import Export|Import Export]]</li>
<li>[[:Category:Project|Project]]</li>
<li>[[:Category:Slot Widget|Slot Widget]]</li>
<li>[[:Category:Tab Widget|Tab Widget]]</li>
</ul>
</div>

<div style="display:block; float:left; width:100%;">

==News==

List of most recently updated Protege plugin pages.

<ask limit="20" mainlabel="Plugin" link="all" sort="last update" order="desc" format="broadtable" default="No news yet.">
[[Category:Plugin]]
[[Last update:=+]] [[Last update:=*|Updated]]
</ask>
</div>

</div>



<div style="display:block; float:right; width:30%;margin: -1em 0 0 0;padding:0;">

<div style="background:#E6FFCC;border:1px solid #B0FF5C;padding: 10px;margin: 0 0 1em 0;">
====Register your Plugin====

Add a new plugin in 2 steps:

<strong>1.</strong> Enter the name of your plugin, which will then be the title of a new article in this wiki.

<strong>2.</strong> Enter as much information as possible in the provided form (don't forget to save your work).

<br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:Plugin|New Plugin]]</strong><br /><br />

==== Register your Organization ====

Add a new organization in 2 steps:

<strong>1.</strong> Enter the name of your organization, which will then be the title of a new article in this wiki.

<strong>2.</strong> Enter as much information as possible in the provided form (don't forget to save your work).

<br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:Organization|New Organization]]</strong><br /><br />

</div>

<div style="background:#EEEEFF;border:1px solid #BDDEFF;padding: 10px;margin: 0 0 1em 0;">

===Search===
Search for plugins, users, or organizations and find useful information about all Protege plugins.
<inputbox>
type=search2
width=25
align=left
break=no
buttonlabel=Search
bgcolor=#EEEEFF
</inputbox>

[[Special:Ask|Semantic Search]]
</div>

</div>

Collaborative Protege

2007-08-20T19:39:53Z

Markus:

{{Plugin
|PluginType=Project
|ForApplication1=Protege-Frames
|ForApplication2=Protege-OWL
|Screenshot=collab-protege.jpg
|Topic1=Project Management
|Affiliation1=Stanford Medical Informatics
|Description=Extension of Protégé that supports the collaborative ontology development process.
}}

<div style="display:block; float:left; width:100%;">

== Overview ==

Collaborative Protégé is an extension of the existing Protégé system that supports collaborative ontology editing. In addition to the common ontology editing operations, it enables annotation of both ontology components and ontology changes. It supports the searching and filtering of user annotations based on different criteria. We have implemented two types of voting mechanisms that can be used for voting of change proposals. Multiple users may edit the same ontology at the same time. All the changes made by one user are seen immediately by other users.

== Installation Guide ==

Collaborative Protégé is distributed with the full installation of Protégé starting with Protégé version 3.3 beta399. You may use Collaborative Protégé both in stand-alone mode and in multi-user mode. The installation guide will use as an example the Newspaper project distributed in the examples/newspaper folder in the Protégé installation directory.

'''Stand-alone mode'''

#Install the full distribution of the latest version of [[Protégé]].
#Start Protégé.
#Open the newspaper.pprj project from the examples/newspaper folder in the Protégé installation directory.
#Enable the ChangesTab from the Project -> Configure menu.
#In the Project -> Configure -> Options panel enable the Track changes checkbox. Click on OK and exit the Configuration panel.
#Disable the ChangesTab from the Project -> Configure menu.
#Save the project. Check in the examples/newspaper folder that a project annotation_newspaper.pprj was created.
#Close the project and reopen it. You should see the collaborative panel.

'''Multi-user mode'''

If you want to use Collaborative Protégé in multi-user mode, you will need to do some additional steps.

#Do all the steps for the installation in [http://protege.stanford.edu/doc/collab-protege/#InstallationStandAlone Stand-alone mode].
#Open the metaproject.pprj project from the examples/server folder in the Protégé installation directory.
#In the ClsesTab, select the class Project and create a new template slot called annotationProject. The slot should have value type Instance and allowed classes Project.
#In the InstanceTab, create a new instance of Project for the annotation_newspaper.pprj. The name of the instance is not important. The location slot should point to the location of the annotation project. For this example, the value of the location slot should be: examples/newspaper/annotation_newspaper.pprj.
#Select the Newspaper instance and set as value of annotationProject slot the Project instance created in the previous step.
#Save the project and close Protégé.

'''Test the Protégé server and client''':

#Start the Protégé server by using the run_protege_server start script.
#Start a Protégé client: Start Protégé and select the Server mode in the Open Project dialog.
#In the Server panel, leave all the default entries like they are. (Hostname: localhost, User: Guest, Password: guest). Click on OK.
#In the Select Project panel, select the Newspaper project. When the project is displayed, you should see also the collaborative pabel.

== User Guide ==

The following guide gives a brief description of the main functionalities of Collaborative Protégé, which are:

* Annotation of classes, properties and instances
* Annotation of changes (for example, class creation, renaming, etc.)
* General discussion threads
* Proposals and voting
* Searching and filtering of annotations by different criteria
* Live discussion (chat) with other users connected to the same server

=== The collaborative panel ===

The main panel of the graphical user interface has been divided in two main panels (see image from below):

* The classical Protégé display (classes, properties and instances view) on the left side, and
* The collaborative panel on the right side.

The classical Protégé display shows the details of the different ontology components, such as classes, properties (slots) and instances. The collaborative panel adds functionality to support the collaborative development of ontologies.

The collaborative panel is made up of two types of tabs.

* The Annotations, Changes and All tabs show information related to the selected item in the class tree. For example, if you select in the class tree the class Person, you will see in these tabs the annotations related to the class Person. In the InstanceTab of the main Protégé display, the collaborative panel is listening to the selection of the instances list (not the class tree). In this way, you may add annotations to the instances.
* The Discussion Threads, Search and Chat tabs are generic tabs that do not listen to the selection of classes in the class tree.

The tabs in the collaborative panel are made up of a top component, which shows an annotation tree and a bottom component which shows the details of the selected annotation in the annotations tree.

It is possible to '''search''' in the annotations tree by using the search component at the bottom of the annotations tree panel. You may use the * wildcard character for your search. The searching is done on the annotation texts.

Another feature is the '''filtering''' of annotations or changes, which may be done by using the Filter component from the top of the annotations tree. You may choose between different types of filters that will be applied to the annotations tree: filtering by author, by annotation text, by annotation type or by creation date. The class tree in the main Protégé display shows a little call-out icon next to the class name if the class has any annotations or change annotations attached to it. In the Slots Tab and Instance Tab in the main Protégé display you will also see the call-out icon if a property (slot) or an instance have annotations attached to them.

===Annotating classes, properties and instances===

The Annotations tab in the collaborative panel, allows you to annotate the currently selected ontology component. By ontology component, we mean classes, properties (or slots) and instances. See image below.

[http://protege.stanford.edu/doc/collab-protege/images/collab-protege.jpg Annotating ontology components screenshot]

The image shows an example of annotations attached to the Publication class. You may create discussion threads related to a particular ontology component (in the example, Publication class). There are different types of annotations that may be attached to an ontology component, such as comments, questions, examples, etc. It is also possible to create proposals and to allow other users to vote. Proposals and voting are described below.

In order to create a new annotation, you have to first select an annotation type from the combo-box at the top of the Annotations tab. Then, you may choose to reply to an existing annotation by clicking on the call-out icon near the combo-box, or you may start a new discussion thread by clicking on the second icon (little rectangle). The third icon allows you to see the details of the anntotation, such as the text of the annotation, the author and creation date.

===Annotating changes===

Collaborative Protégé is continously tracking the changes that users are doing. You can see the changes related to a certain ontology component (for example, a class) in the Changes tab of the collaborative panel.

Besides annotating ontology components themselves, you may also annotate changes of the ontology. For example, you may comment on a class rename operation or on the addition of a property to a class, as show in the image below. Annotation of changes may be done in the Changes Tab in the collaborative panel (see image below).

[http://protege.stanford.edu/doc/collab-protege/images/changes.jpg Annotating changes screenshot]

If you want to create an annotation on a change, you have to first select an annotation type from the combo-box at the top of the Changes tab. Then, select a change in the annotations tree and click on the call-out icon next to the combo-box. The second icon allows you to see the details of the selected changes and anntotations.

The All (Ann. & Chg.) tab allows you to see both the annotations and the changes related to a certain ontology component in an integrated view.

===Discussion threads===

The Discussion Threads tab allows you to create generic discussion threads that are not necessarily related to a certain ontology component. The Discussion Threads tab is show in the image below.

[http://protege.stanford.edu/doc/collab-protege/images/discussionThreads.jpg Discussion threads screenshot]

First you need to select an annotation type from the combo-box at the top of the Discussion threads tab. If you want to start a new discussion thread, please use the Create icon at the top of the annotations tree (little rectangle icon). If you would rather reply to an existing message, please select first the annotation you would like to reply to and then click on the call-out icon. The view icon allows you to see the details of a certain message.

===Proposals and Voting===

Collaborative Protégé supports two different types of proposals and voting:

* Agree / Disagree proposals, which users may vote with a Agree / Disagree vote
* Five Starts Vote proposals and the corresponding Five Star voting.

Currently the prototype does not support workflows for proposals (such as starting and closing a proposal), but we intend to add this feature in the near future.

If you want to start a proposal, you can do this in one of the Annotations, Changes, All or Discussion Threads tabs. It is possible to start a proposal related to a certain ontology component, for example, a class. For this case, please create a proposal in the Annotations tab, after selecting the class in the Protégé classes tree. Then, select in the annotations type combo-box one of the AgreeDisagreeProposal or the FiveStarVoteProposal and click on the create annotation icon (little rectangle icon). You will see in the annotations tree a new node that has as an icon a little text file icon.

It is also possible to start a proposal related to a change, which you can do in the Changes tab of the collaborative panel. If you want to start a generic proposal not related to a particular ontology component, you can do this in the Discussion Threads tab.

After you have created a proposal, other users may vote for it by selecting in the annotations type combo-box the corresponding vote type. Users may also comment their votes in the vote details pane at the bottom of the collaborative panel.

===Searching===

Besides the simple search functionality available in all the tabs of the collaborative panel (more about this here), user may also do complex searches in the Search tab.

[http://protege.stanford.edu/doc/collab-protege/images/search.jpg Searching screenshot]

The Search tabs allows you to specify differnty types of searches that can be combined by an AND or OR condition:

* Author name
* Annotation text
* Annotation type
* Date

Once you click on the Search button, the results of the search are shown in the Search Results panel. You may see details on a certain result either in the bottom details panel or by clicking on the view icon from the top of the Search Results pane.

===Chat with other users===

You may chat with other users that are connected at the same time on the Protégé server. All the chat messages are broadcasted to all the users. You can see the users that are connected to the server in the task bar at the bottom of the main Protégé display.

[http://protege.stanford.edu/doc/collab-protege/images/chat.jpg Chat screenshot]

If a chat message is received, while you are browsing another tab, the icon and font of the chat tab will change so that it attracts your attention. You can see this in the image from above. If there are no new messages in the Chat tab, you will see a smiley icon next to the Chat tab title.

==Contact and support==

Collaborative Protégé is actively developed and supported. It is currently just a prototype that we intend to extend into a full-fledged web-based application for collaborative ontology development. All your feedback is welcome! Please send comments, questions and bug-reports to tudorache at stanford.edu.

==Resources==

For more information, please see the following links:

* [http://protege.stanford.edu/doc/collab-protege/doc/collabProtege_demo.pdf A short paper describing Collaborative Protégé]
* [http://protege.stanford.edu/doc/collab-protege/doc/collabProtegeShortPresentation.pdf A short presentation of Collaborative Protégé]
* [http://protege.cim3.net/cgi-bin/wiki.pl?MultiUserTutorial Protégé Multi-User Tutorial]
* [http://protege.stanford.edu/doc/users.html Protégé user guides]

</div>

SWRLTab

2007-08-20T19:39:31Z

Markus:

{{Plugin
|PluginType=Tab Widget
|ForApplication1=Protege-OWL
|DeveloperID1=Martin O'Connor
|LastUpdated=July 6, 2007
|Topic1=Inference
|Topic2=Reasoning
|Affiliation1=Stanford Medical Informatics
|Description=An extension to Protege-OWL that supports editing and execution of SWRL rules.
}}

<div style="display:block; float:left; width:100%;">

== More Information ==

The SWRLTab is a development environment for working with [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLLanguageFAQ SWRL] rules in [http://protege.stanford.edu/overview/protege-owl.html Protege-OWL]. It supports the editing and execution of SWRL rules. It also provides mechanisms to allow interoperation with a variety of rule engines and the incorporation of user-defined libraries of methods that can be used in rules. Several libraries are provided. These libraries include collections of mathematical, string, and temporal operators, in addition to operators than can be used to effectively turn SWRL into a query language.

A introduction to the SWRL language can be found [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLLanguageFAQ here]. An explanation on how SWRL can be used as a query language can be found [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLQueryBuiltIns here].

The SWRLTab has several software components:

* '''SWRL Editor''': The editor supports editing and saving of SWRL rules in an OWL ontology. See the [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLEditorFAQ SWRL Editor FAQ] for more details.

* '''SWRL Bridge''': The bridge provides the infrastructure necessary to incorporate rule engines into Protege-OWL to execute SWRL rules. See the [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLRuleEngineBridgeFAQ SWRL Rule Engine Bridge FAQ] for more details. The hope is that bridges for other rule engines will be developed by the Protege-OWL community and than an array of inference mechanism will become available for executing SWRL rules.

* '''SWRL Jess Bridge''': A bridge for the Jess rule engine is provided in the Protege-OWL distribution. A user interface called the [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLJessTab SWRLJessTab] is also provided to interact with this bridge.

* '''SWRL Built-in Bridge''': [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLBuiltInFAQ SWRL built-ins] are user-defined predicates that can be used in SWRL rules. The SWRLTab has a subcomponent called the [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLBuiltInBridge built-in bridge] that provides a mechanism to define Java implementations of SWRL built-ins. These implementations can then be dynamically loaded by the bridge and invoked from a rule engine.

* '''SWRL Built-in Libraries''': A number of built-in libraries are provided by the SWRLTab. These include an implementation of the core SWRL built-ins defined in the [http://www.w3.org/Submission/SWRL/ SWRL Submission] and built-ins for querying OWL ontologies. The libraries are documented [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLTabBuiltInLibraries here].

* '''SWRL Query Tab''': The query tab provides a graphical interface to display the results of SWRL rules that contain [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLQueryBuiltIns query built-ins]. It is documented [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLQueryTab here].

* '''SWRL Query API''': This API provides a JDBC-like Java interface to retrieve the result of SWRL rules containing query built-ins. It is documented [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLQueryAPI here].

* '''SWRL Factory''': The factory provides high-level Java APIs that support the creation and modification of SWRL rules in an OWL ontology. This API can be used by developers who wish to work with SWRL rules in their applications. See the [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLFactoryFAQ SWRL Factory FAQ] for more details.

The SWRLTab is designed to work in Protege-OWL only. However, partial interoperation with Jena is also supported. See [http://protege.cim3.net/cgi-bin/wiki.pl?ProtegeJenaIntegration#nid8KU here] for details.

== Activation ==

The SWRLTab should be visible for all OWL knowledge bases that import the [http://www.daml.org/rules/proposal/swrl.owl SWRL ontology]. It is disabled by default if the loaded knowledge base does not import this file.

To activate the SWRLTab in a project that does not include this ontology, go to Project | Configure in the Protege-OWL GUI and check the "SWRLTab" box. The tab will then appear. The user can then navigate to this tab, whereupon they will be given the option to import the SWRL ontology.

== Papers ==

* "[http://smi-web.stanford.edu/auslese/smi-web/reports/SMI-2005-1080.pdf Supporting Rule System Interoperability on the Semantic Web with SWRL]" M. J. O'Connor, H. Knublauch, S. W. Tu, B. Grossof, M. Dean, W. E. Grosso, M. A. Musen. Fourth International Semantic Web Conference ([http://iswc2005.semanticweb.org/ ISWC2005]), Galway, Ireland, 2005.

== Presentations ==

* [http://protege.cim3.net/file/pub/files/SWRL/SWRLTalkISWC2005.pdf Slides] from 20 minute talk at [http://iswc2005.semanticweb.org/ ISWC2005].
* [http://protege.cim3.net/file/pub/files/SWRL/SWRLTalkProtegeShortCourse2006.pdf Slides] from 60 minute talk at [http://protege.stanford.edu/shortcourse/protege/200603/ 2006 Protege Short Course].

== Installation ==

The SWRLTab is part of Protege-OWL and does not need to be downloaded separately. It has been available since version 3.1 of Protege. However, since many of the SWRLTab components are under active development, the most recent Protege-OWL beta build should be used when possible.

The Protege-OWL distribution does not include any rule engines. If a particular rule engine is used, it must be installed separately. At present, only the Jess rule engine is supported. Information on installing Jess is described [http://protege.cim3.net/cgi-bin/wiki.pl?SWRLJessTab#nid6RJ here].

== Source Code ==

The SWRLTab is open source and all of its source code is bundled with the Protege-OWL source code. This source code is available for download from the [http://smi-protege.stanford.edu/svn/owl/trunk/ Protege-OWL Subversion Repository].

== How can I get help? ==

Questions and comments on the SWRLTab should be sent to the Protege-OWL mailing list (protege-owl at lists dot stanford dot edu). This list is monitored by the developers of the SWRLTab.

</div>

PROMPT 3.0

2007-08-20T19:39:11Z

Markus:

{{VersionOfPlugin
|VersionOf=PROMPT
|Number=3.0
|LastUpdate=November 30, 2006
|File=http://protege.stanford.edu/download/download.html
|CompatibleWith1=Protege-OWL 3.2.1
|CompatibleWith2=Protege-Frames 3.2.1
|Changelog=see page for details
}}

<div style="float:left;">

==Changelog Details==

*'''Mapping mode''': create a mapping between two ontologies, and execute the mapping using a mapping interpreter
**Make sure to check out the page on ConfiguringPromptProjects

*'''Plug-in architecture''': plug in your own mapping algorithms for initial comparison of ontologies or your own user interface components
**For developers: [http://protege.cim3.net/cgi-bin/wiki.pl?PluginsForPrompt developing plugins for Prompt]
**Available Prompt plug-ins (these plugins are installed when you install Prompt):
***[http://www.cs.uvic.ca/~seanf/cogz/cogz.html CogZ]: use [http://www.thechiselgroup.org/jambalaya/ Jambalaya-style] visualizations for mappings
***FOAM in Prompt: use the [http://www.aifb.uni-karlsruhe.de/WBS/meh/foam/ FOAM] algorithm for mapping
***Synonyms: if you have synonyms for your terms, have Prompt use synonyms in creating lexical mappings

'''Important notice''': the Prompt build available with the Protege download (Protege 3.2 beta, build 331) has a bug in the FOAM plug-in to Prompt. Unfortunately, due to some recent hardware difficulties, we are unable to run a new Protege build at this time. Thus, if you would like to try out the FOAM plug-in for Prompt, you will need to do the following:

*[http://protege.cim3.net/file/pub/files/prompt/edu.stanford.smi.protegex.foamplugin.zip Download] an updated version of the Prompt FOAM plug-in.

*Navigate to the Prompt plug-ins directory: <protege-install-dir>/plugins/edu.stanford.smi.protegex.prompt/plugins.

*Replace the folder entitled "edu.stanford.smi.protegex.foamplugin" in this directory with the one you just downloaded and unzipped.

</div>

PROMPT

2007-08-20T19:38:53Z

Markus:

{{Plugin
|PluginType=Tab Widget
|ForApplication1=Protege-Frames
|ForApplication2=Protege-OWL
|DeveloperID1=Natasha Noy
|DeveloperID2=Michel Klein
|DeveloperID3=Sandhya Kunnatur
|DeveloperID4=Abhita Chugh
|DeveloperID5=Sean Falconer
|Topic1=Project Management
|License=Mozilla Public License
|Affiliation1=Stanford University
|Description=Manage multiple ontologies, create a mapping between ontologies, merge separate ontologies to create a single coherent ontology, extract a part of an ontology, and move frames from an included to an including project.
}}

<div style="width: 100%;float: left;">
==Documentation==

* [http://protege.cim3.net/file/pub/files/prompt/documentation/PROMPT_2-1_Documentation.zip Documentation] (detailed, but outdated)
* [http://protege.cim3.net/file/pub/files/prompt/documentation/PROMPT_Tutorial.zip Tutorials and sample projects]
* [http://protege.cim3.net/cgi-bin/wiki.pl?PromptPapers PromptPapers]: papers describing the work related to Prompt

==Tips and tricks==

* Using the [http://protege.cim3.net/cgi-bin/wiki.pl?MappingOntology MappingOntology] with Prompt
* [http://protege.cim3.net/cgi-bin/wiki.pl?SavingMappings Saving mappings while performing a merge]
* [http://protege.cim3.net/cgi-bin/wiki.pl?UserManagementInPromptDiff Accepting and rejecting changes between versions for specific users]
* [http://protege.cim3.net/cgi-bin/wiki.pl?SavingDiffPromptPlugin Saving the diff result in your own format]

</div>

OBOConverter

2007-08-20T19:38:30Z

Markus:

{{Plugin
|PluginType=Import Export
|ForApplication1=Protege-OWL
|DeveloperID1=Dilvan Moriera
|DeveloperID2=Nigam Shah
|LastUpdated=December 20, 2006
|Topic1=Import
|Topic2=Export
|Description=This is a Tab plugin to convert OBO format ontology files into OWL files using the OBO-to-OWL mapping created by NCBO.
}}

<div style="display:block; float:left; width:100%">

== More information ==

The mapping is described [http://www.bioontology.org/wiki/index.php/OboInOwl:Main_Page here].

== Source Code ==

The source code for the plugin is available [http://smi-protege.stanford.edu/svn/obo-converter/trunk/ here].

Compile the plugin to use it.

Alternatively you can download [http://smi-cbio01.stanford.edu/~nigam/OBOConverter.zip this zip file], unzip it and put the contents under the Plugins folder on your protege installation.

</div>

OWLViz

2007-08-20T19:36:44Z

Markus:

{{Plugin
|PluginType=Tab Widget
|ForApplication1=Protege-OWL
|Screenshot=OwlViz.jpg
|DeveloperID1=Matthew Horridge
|LastUpdated=March 3, 2005
|Topic1=Visualization
|License=Lesser GNU Public License
|Affiliation1=The University Of Manchester
|Affiliation2=The CO-ODE Project
|Description=It enables the class hierarchies in an OWL Ontology to be viewed and incrementally navigated, allowing comparison of the asserted class hierarchy and the inferred class hierarchy.
}}

<div style="float:left;">
==More Details==

OWLViz is designed to be used with the Protege OWL plugin. It enables the class hierarchies in an OWL Ontology to be viewed and incrementally navigated, allowing comparison of the asserted class hierarchy and the inferred class hierarchy. OWLViz integrates with the Protege-OWL plugin, using the same colour scheme so that primitive and defined classes can be distinguished, computed changes to the class hierarchy may be clearly seen, and inconsistent concepts are highlighted in red. OWLViz has the facility to save both the asserted and inferred views of the class hierarchy to various concrete graphics formats including png, jpeg and svg.

==Installation==

You need a recent version of the GraphViz tools, which are available [http://www.research.att.com/sw/tools/graphviz/ here]

Please read the [http://www.co-ode.org/downloads/owlviz/OWLVizGuide.pdf OWLVizGuide] for installation instructions.

==Level of Support==

OWLViz is under active development. All comments and suggestions/feature request will be appreciated! Please post questions and requests to the Protege OWL mailing list where I will respond to them.

</div>

Algernon

2007-08-20T19:35:34Z

Markus:

{{Plugin
|PluginType=Tab Widget
|ForApplication1=Protege-Frames
|Screenshot=Algernon.jpg
|DeveloperID1=Micheal Hewett
|LastUpdated=January 3, 2005
|Topic1=Inference
|Topic2=Reasoning
|License=Mozilla Public License
|Affiliation1=Hewett Research
|Description=Algernon performs forward and backward rule-based processing of frame-based knowledge bases, and efficiently stores and retrieves information in ontologies and knowledge bases.
}}

<div style="float:left;">
==Description==

Algernon supports forward and backward chaining rules, much like CLIPS or JESS. However, it is easier to use with Protege because it operates directly on Protege knowledge bases rather than requiring a mapping operation to and from a separate memory space. It is written in Java and is compatible with Protege v1.8, v1.9, v2.0, v2.1 and Java versions 1.3 and 1.4.

The Algernon tab allows you to execute Algernon queries and assertions within the Protege GUI. You can perform any Ask or Tell operation, including rule definition, slot value set, get and delete, frame deletion, ontology traversal, and more. It allows nearly complete access to the Protege API, as well as the ability to call external Java methods and to call an internal LISP subsystem.

==Installation==

*For Protege 2.x, download algernon-protege.zip file and unzip it in the Protege plugins directory.
*For Protege 1.x, place the algernon.jar file in your Protege plugins directory.

==Documentation==

[http://algernon-j.sourceforge.net/doc/ Click here to view the Algernon documentation.]

</div>

JessTab

2007-08-20T19:34:05Z

Markus:

{{Plugin
|PluginType=Tab Widget
|ForApplication1=Protege-Frames
|ForApplication2=Protege-OWL
|Screenshot=Jess.gif
|DeveloperID1=Henrik Eriksson
|LastUpdated=November 20, 2006
|Topic1=Inference
|Topic2=Reasoning
|Affiliation1=Linköping University
|Description=JessTab provides a Jess console window where you can interact with Jess while running Protégé.
}}

<div style="float:left;">
==Description==

JessTab is a plug-in for Protégé that allows you to use Jess and Protégé together. It gives you the best of both worlds. JessTab provides a Jess console window where you can interact with Jess while running Protégé. Furthermore, JessTab extends Jess with additional functions that allows you to map Protégé knowledge bases to Jess facts. Also, there are functions for manipulating Protégé knowledge bases from Jess.

Using JessTab, you can develop programs that manage Protégé knowledge bases directly, and you can write rules that fire on patterns in the knowledge base. It is possible to use JessTab as an object-oriented extension to Jess by defining Protégé classes and instantiating them. Because, Protégé has explicit metaclasses you can map them to facts as well and perform pattern matching on properties of classes.

==Documentation==

*[http://www.ida.liu.se/~her/JessTab/JessTab.pdf JessTab documentation] in pdf format. This document describes the JessTab functionality. Also, it contains installation instructions for JessTab.
*[http://www.ida.liu.se/~her/JessTab/tutorial06/ JessTab tutorial] given at the 9th Intl. Protégé Conference. This tutorial provides an introduction to Jess and JessTab for the Protege user. Slides and webcast are available on-line.
*JessTab paper describing the integration of Protégé and Jess:
**Henrik Eriksson. The JessTab approach to Protégé and Jess integration. In Proceedings of Intelligent Information Processing (IIP-2002), pp. 237-248, August 25-30, 2002, Montréal, Québec, Canada.
*A revised version of this paper is published as:
**Henrik Eriksson. Using JessTab to Integrate Protégé and Jess. IEEE Intelligent Systems, 18(2):43-50, 2003.

==Presentations==

*[http://www.ida.liu.se/~her/JessTab/JessTab.ppt Slides] [PowerPoint] from JessTab presentation at [http://kogs-www.informatik.uni-hamburg.de/~neumann/IIP-Webseiten/ IIP-2002] in MS PowerPoint format.
*[http://protege.stanford.edu/conference/2003/Henrik_Eriksson_JessTabProtegeWS.pdf Slides] [PDF] from the JessTab presentation at the [http://protege.stanford.edu/conference/2003/ Sixth International Protégé Workshop] in Manchester.

==Download and installation==

As of Protégé version 3.1, JessTab is part of the full Protégé distribution. Just enable the tab under Project -> Configure and follow the instructions. Note that Jess itself is not part of the distribution. You must install Jess manually to be able to run it.

You should put the JessTab.jar file in the plugins/JessTab directory under the Protégé installation. The file plugin.properties should go in the same directory. Furthermore, you need to obtain and possibly compile [http://herzberg.ca.sandia.gov/jess/ Jess] if you do not have it already. Jess must be available in the plugins/JessTab directory. The JessTab documentation provides additional installation instructions.

==Caution==

Avoid doing (mapclass owl:Thing) under OWL, because JessTab will map all the hidden RDF/OWL classes as well, which may result in a large amount of unwanted Jess facts and stability problems. For the same reason, avoid mapping metaclasses and metaproperties under OWL. Use an intermediate subclass of owl:Thing and map this class instead.

==Source code==

The source code for JessTab is available for download (maintained as a [http://sourceforge.net/svn/?group_id=28307 Subversion repository]).

</div>

TGViz 1.4

2007-08-20T19:32:17Z

Markus:

{{VersionOfPlugin
|VersionOf=TGViz
|Number=1.4
|LastUpdate=October 12, 2004
|File=http://www.ecs.soton.ac.uk/%7Eha/TGVizTab/counter/odtrack.php?url=http://www.ecs.soton.ac.uk/%7Eha/TGVizTab/TGVizTab_v1.4.zip
|CompatibleWith1=Protege-Frames 3.0
|CompatibleWith2=Protege-OWL 3.0
|Changelog=more details on page
}}

<div style="float:left;">
==More Details==

*Compiled for Protégé 3.0 (build 71)
*Displays OWL ontologies
*Control over the speed of graph display

</div>

TGViz

2007-08-20T19:31:43Z

Markus:

{{Plugin
|PluginType=Tab Widget
|ForApplication1=Protege-Frames
|ForApplication2=Protege-OWL
|Screenshot=TGViz.jpg
|DeveloperID1=Harith Alani
|LastUpdated=November 25, 2005
|Topic1=Visualization
|Affiliation1=University of Southampton
|Description=TGVizTab is a plugin for Progégé which allows visualizing ontologies using the TouchGraph library.
}}

<div style="float:left;">
==More Details==

TGVizTab is a plugin for Progégé which allows visualizing ontologies using the [http://www.ecs.soton.ac.uk/%7Eha/TGVizTab/counter/odtrack.php?url=http://www.touchgraph.com/index.html TouchGraph] library. TouchGraph provides an java library for rendering networks as interactive graphs. This library has been modified and integrated with Progégé as a tab plugin.

TGVizTab plugin offers the following:

*Visualizing classed and instances
*Network depth control
*Change graph colors
*Different slots can be displayed in different colors
*Hide/show individual slots and nodes
*Geometric and hyperbolic zooms
*Graph rotation
*Node search
*Save/load graphs and settings
*etc

==Demo==

Here is a short screencam (1.41 minute) demonstrating how the plugin works ([http://users.ecs.soton.ac.uk/ha/TGVizTab/demo.avi avi], [http://users.ecs.soton.ac.uk/ha/TGVizTab/demo.mov mov]).
Note that this video is for v 1.2, but it's mostly the same!

==Installation==

Unzip the file into Protégé's plugins directory.

</div>

Jambalaya 2.3.5

2007-08-20T19:31:02Z

Markus:

{{VersionOfPlugin
|VersionOf=Jambalaya
|Number=2.3.5
|LastUpdate=April 11, 2006
|File=http://prdownloads.sourceforge.net/chiselgroup/jambalaya_2_3_5_build_4_Tue_April_11_2006_at_03_40_08_PDT.zip?download
|CompatibleWith1=Protege-Frames 3.2.1
|CompatibleWith2=Protege-Frames 3.3.1
|CompatibleWith3=Protege-OWL 3.2.1
|CompatibleWith4=Protege-OWL 3.3.1
|Changelog=see page for more details
}}

Jambalaya 2.6.0

2007-08-20T19:29:54Z

Markus:

{{VersionOfPlugin
|VersionOf=Jambalaya
|Number=2.6.0
|LastUpdate=May 17, 2007
|File=http://downloads.sourceforge.net/chiselgroup/jambalaya_2_6_0_build_53_Thu_May_17_2007_at_04_33_50_PDT.zip?use_mirror=osdn
|CompatibleWith1=Protege-Frames 3.3.1
|CompatibleWith2=Protege-OWL 3.3.1
|Changelog=see details on page
}}

<div style="float:left;">

==Changelog Details ==
*Improved the way Jambalaya starts to only load itself when the tab is activated. Jambalaya also now properly disposes itself when the tab is closed.
*Added a Properties action to the right click menu of nodes and arcs. It displays the Protégé Properties Dialog. You can also double click on an arc to display the same dialog.
*Change Root ClassesThe root class(es) are displayed at the bottom of the main view in Jambalaya ("Roots: ..."). This will usually be :THING, but this is configurable. You can drag and drop classes onto the Jambalaya quick view buttons to select your working set, or you can click the "Root: ..." button.
*Added icons to nodes in Jambalaya when in the Above Node label modes.
*Jambalaya is integrated with [http://www.thechiselgroup.org/?q=diamond Diamond]

</div>

Jambalaya

2007-08-20T19:28:45Z

Markus:

{{Plugin
|PluginType=Tab Widget
|ForApplication1=Protege-Frames
|ForApplication2=Protege-OWL
|Screenshot=Jambalaya.jpg
|DeveloperID1=Margaret-Anne Storey
|DeveloperID2=Chris Callendar
|DeveloperID3=Rob Lintern
|DeveloperID4=Neil Ernst
|DeveloperID5=Casey Best
|LastUpdated=April 1, 2007
|Topic1=Visualization
|License=see homepage
|Affiliation1=Chisel
|Affiliation2=University Of Victoria
|Description=Jambalaya is a plug-in created for Protégé which uses Shrimp to visualize regular Protégé and OWL knowledge-bases.
}}

<div style="float:left;">

==Documentation==

Documentation can be found at the Jambalaya web pages.

==Level of Support==

Jamabalaya is under active developement. We would very much like to receive your feedback, feature requests, and bug reports at [mailto:chisel-support@cs.uvic.ca chisel-support@cs.uvic.ca].

</div>

InstanceTree

2007-08-20T19:27:41Z

Markus:

{{Plugin
|PluginType=Tab Widget
|ForApplication1=Protege-Frames
|Screenshot=instance-tree-tab.jpg
|DeveloperID1=Eric Xu
|DeveloperID2=Joe Edelman
|LastUpdated=July 6, 2007
|Topic1=Search
|Topic2=Navigation
|License=Mozilla Public License
|Affiliation1=Stanford University
|Affiliation2=Dartmouth
|Description=Provides a tree view of frames referenced directly or indirectly by a Protege instance.
}}

<div style="display:block; float:left; width:100%;">

== Description ==

The InstanceTree widgets allow navigation of frames that are directly and indirectly referenced from an instance in a tree structure. There are three separate widgets that are accessible from within the Protege user interface:

* The InstanceTree tab displays instances of a class as root nodes of trees, where each tree consists of frames that are referenced directly or indirectly by a root instance through own slot values. Selecting an instance in the tree displays the form associated with the instance. Thus it allows you to browse and edit, in a single window, all the frames reachable from instances of a selected class. Clicking on a slot name highlights the widget associated with the slot.
* The KnowledgeTree tab allows a user to specify a root node for an instance tree. Thus it shows a "top-level" instance and allows navigation to instances "contained" in that instance.
* The InstanceTree slot widget, when associated with a slot of type Instance, displays values of the slot as root nodes of trees.

== Installation ==

All of the InstanceTree widgets are bundled with the "full" installation of Protege.

== Screenshots ==

To follow is a screenshot of the InstanceTree tab. The left-most pane displays the class browser, the middle pane shows the instances of the selected class, and right-most pane shows the instance form for the selected instance:

[http://protege.cim3.net/file/pub/images/InstanceTree/instance-tree-tab.png InstanceTree Tab screenshot]

To follow is a screenshot of the KnowledgeTree tab. The left pane displays a "top-level" instance. In this case, the user chose an instance of the Newspaper class. The right pane shows the instance form for the selected instance:

[http://protege.cim3.net/file/pub/images/InstanceTree/knowledge-tree-tab.png KnowledgeTree Tab screenshot]

To follow is a screenshot of the InstanceTree slot widget. In this case, the user assigned the InstanceTree widget to the employees slot, which is a slot of type Instance. The user can then navigate the slot values of the employee slot in a tree structure:

[http://protege.cim3.net/file/pub/images/InstanceTree/instance-tree-slot.png InstanceTree Slot screenshot]

== Level of Support ==

These plug-ins are no longer under active development. If you have questions, you can try posting them to the [https://mailman.stanford.edu/mailman/listinfo/protege-discussion protege-discussion mailing list], and someone from the community may be able to help you.

The [http://smi-protege.stanford.edu/svn/instance-tree/trunk/ source code] for this tab is available from the Protege Subversion repository.

</div>

JSave

2007-08-20T19:27:18Z

Markus:

{{Plugin
|ForApplication1=Protege-Frames
|ForApplication2=Protege-OWL
|DeveloperID1=Samson Tu
|LastUpdated=July 11, 2007
|Topic1=Software Engineering
|License=Mozilla Public License
|Affiliation1=Stanford University
|Description=JSave can be used to generate Java class definition stubs for Protege classes.
}}

<div style="float:left;">
==Description==

JSave can be used to generate Java class definition stubs for Protege classes. The top level classes extend DefaultSimpleInstance, so that instances of the generated Java classes are also Protege instances and can use Protege API calls. A developer can add his or her own methods to the Java class definition. Regenerating Java class stubs will update the stubs while preserving user-supplied code. An option of the package allows generation of Java bean access methods and listeners.

==Installation.==

JSave is bundled with the "full" installation of Protege.

==Documentation==

The documentation for JSave is in the form of an HTML document entitled "jsave.html" and can be found in the following location (once you have installed Protege on your system): <pre><nowiki><protege-install-dir>/applications/jsave/jsave.html.</nowiki></pre>

If you would like to read the documentation without installing Protege, you can view jsave.html from our Subversion repository [http://smi-protege.stanford.edu/svn/jsave/trunk/docs/jsave.html here]. Click the "download" link in the top left corner of the page.

==Level of Support==

Author will answer questions via email, fix bugs, and consider new feature requests as time permits.

The source code for JSave is available from the Protege Subversion repository.
*browse the code via a Web interface [http://smi-protege.stanford.edu/svn/jsave/trunk/ here]
*download the source code with a Subversion client [http://smi-protege.stanford.edu/repos/protege/jsave/trunk/ here]

</div>

XML Tab

2007-08-20T19:26:44Z

Markus:

{{Plugin
|PluginType=Tab Widget
|ForApplication1=Protege-Frames
|ForApplication2=Protege-OWL
|Screenshot=XMLTab.jpg
|DeveloperID1=Michael Sintek
|LastUpdated=July 11, 2007
|Topic1=Import
|Topic2=Export
|License=Mozilla Public License
|Affiliation1=Stanford University
|Description=The XML Tab enables users to import an XML document into Protege, creating a set of classes and instances in a knowledge base which correspond to the entries in the XML document.
}}

<div style="float:left;">
==Description==

The XML Tab enables users to import an XML document into Protege, creating a set of classes and instances in a knowledge base which correspond to the entries in the XML document. It also enables a Protege knowledge base to be saved as an XML document, easily publishable on the Web.

==Installation==

The XMLTab is bundled with the "full" installation of Protege.

</div>

DataMaster

2007-08-20T19:26:19Z

Markus:

{{Plugin
|PluginType=Tab Widget
|ForApplication1=Protege-Frames
|ForApplication2=Protege-OWL
|DeveloperID1=Csongor Nyulas
|LastUpdated=July 11, 2007
|Topic1=Import
|Topic2=Export
|License=Mozilla Public License.
|Affiliation1=Stanford Medical Informatics
|Affiliation2=Stanford University
|Description=DataMaster is a Protege plug-in for importing schema structure and data from relational databases into Protege.
}}

<div style="float:left;">
==Description==

DataMaster is a Protege plug-in for importing schema structure and data from relational databases into Protege. DataMaster supports both OWL and frame-based ontologies and can be used with any relational database with JDBC/ODBC drivers.

Part of the rationale for developing DataMaster was that existing Protege plug-ins such as [http://protege.cim3.net/cgi-bin/wiki.pl?DataGenie DataGenie] do not support OWL ontologies or schema-only imports.

==Installation==

DataMaster is bundled with the "full" installation of Protege (versions 3.3 beta and higher).

The [http://smi-protege.stanford.edu/repos/protege/datamaster/trunk/ source code] for DataMaster is available from the Protege Subversion repository.

==Documentation==

This section will be fleshed out in the near future.

In the interim, please refer to the [http://protege.stanford.edu/conference/2007/presentations/10.01_Nyulas.pdf abstract for the presentation about DataMaster] at the [http://protege.stanford.edu/conference/2007/index.html 10th International Protege Conference].

</div>

OntoViz

2007-08-20T19:24:10Z

Markus:

{{Plugin
|PluginType=Tab Widget
|ForApplication1=Protege-Frames
|ForApplication2=Protege-OWL
|Screenshot=OntoViz.gif
|DeveloperID1=Michael Sintek
|LastUpdated=July 11, 2007
|Topic1=Visualization
|License=Mozilla Public License.
|Affiliation1=Stanford University
|Description=The OntoViz Tab allows you to visualize Protege ontologies with the help of a highly sophisticated graph visualization software called "Graphviz" from AT&T.
}}

<div style="float:left;">

==Installation==

The OntoViz Tab is bundled with the "full" installation of Protege 3.3.

Once you have installed Protege, you must also:

a). Install the appropriate version of the [http://www.graphviz.org/ Graphviz] graph visualization software for your platform.

b). Modify your "protege.properties" file to specify where you installed Graphviz. For example, if you installed Graphviz in C:\Program Files\ATT\Graphviz\, you would add the following line to protege.properties:

<pre><nowiki>dot.command=C\:\\Program\ Files\\ATT\Graphviz\\bin\\dot</nowiki></pre>

The protege.properties file is located in the root directory of your Protege installation and an example protege.properties file is included in the OntoViz subdirectory for your reference

<pre><nowiki><protege-install-dir>/plugins/dfki.protege.ontoviz/protege.properties</nowiki></pre>

In addition to specifying the path to the Graphviz dot executable, you can set the following optional attributes:

<pre><nowiki>dot.font=<font-name> (optional; usually Arial)</nowiki></pre>

<pre><nowiki>dot.fontsize=<size-specification> (optional; usually -2 or -3)</nowiki></pre>

<pre><nowiki>dot.fontpath=<path-to-ttf-directory> ( needed on some flavors of Unix;
on Solaris: /usr/openwin/lib/X11/fonts/TrueType )</nowiki></pre>

===Mac specific notes on installation===

Many thanks go to Andy Spydell for providing the following Macintosh specific instructions for configuring OntoViz and Graphviz. Andy used Mac OS X (10.4):

Download the latest [http://www.pixelglow.com/graphviz/download/ Mac OS X version of Graphviz] (current is 1.13 v16). I chose the disk image version (dmg) version. Upon extracting and mounting, you will find two files contained within the disk image: Graphviz (an Application) and an Examples directory.

Create a directory to hold the Graphviz application and Examples directory at a location of your choice (for example, I created a directory called /Users/andy/Developer/Tools/Graphviz). The disk image is named something like "Graphviz 1.13 (v16)", which makes a poor directory name due to the spaces, period, and parentheses.

Copy the Graphviz application and Examples directory into your newly created directory.

In the Finder, locate the file named "protege.properties" in the Protege directory, and open it with TextEdit (right-click, open, other, select TextEdit). You need to add a line to the file that tells Protege where to find the Graphviz UNIX executable. For me, the line of text looks exactly like:

<pre><nowiki>dot.command=/Users/andy/<nowiki>Developer/Tools/Graphviz/Graphviz.app/Contents/MacOS/dot</nowiki></pre>

Save and close TextEdit.

If you don't see any graphs after you begin using the OntoViz Tab in Protege, verify that the dot.command value does in fact represent the "dot" UNIX executable. The easiest way to do this is with the Terminal and "ls" command. Copy the dot.command value from the protege.properties file and paste it into a Terminal window:

<pre><nowiki> terminal> ls /Users/andy/Developer/Tools/Graphviz/Graphviz.app/Contents/MacOS/dot</nowiki></pre>

If the file is not found, you will then need to correct the path value in protege.properties.

==Documentation==

You can find more information [http://protege.cim3.net/cgi-bin/wiki.pl?OntoViz here]

</div>

OntoViz 1.0

2007-08-20T19:23:43Z

Markus:

{{VersionOfPlugin
|VersionOf=OntoViz
|Number=1.0
|LastUpdate=July 11, 2007
|File=http://protege.cim3.net/cgi-bin/wiki.pl?OntoViz
|CompatibleWith1=Protege-Frames 3.2.1
|CompatibleWith2=Protege-OWL 3.2.1
|Changelog=see page for more details
}}

Template:Plugin

2007-08-20T19:23:01Z

Markus:

<includeonly>{{PluginWikiHeader|ID={{PAGENAME}}|{{ #if:{{{DeveloperID1|}}} | Author1={{{DeveloperID1}}} }}}}<div class="PluginSidebar">{{ #if: {{{Screenshot|}}} | <p>[[Screenshot:={{{Screenshot}}}|[[Image:{{{Screenshot}}}|thumb|100%|center|Screenshot]]]]</p> | }}
{| class="PluginWikiInfoBox" cellspacing="0" cellpadding="5"
|-
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|-
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|-
| class="InfoBoxCol" | Last Update || {{ #if:{{{LastUpdated|}}} | [[Last update:={{{LastUpdated}}}]] | not available }}
|-
| class="InfoBoxCol" | Current Version || <ask format="template" template="CurrentVersion" limit="1" searchlabel="" sort="Version number" order="descending" default="no version available">[[Category:Version]] [[version of::{{PAGENAME}}]] [[Version number:=*]]</ask>
|-
| class="InfoBoxCol" | Homepage || {{ #if:{{{HomepageURL|}}} | [[Homepage:={{{HomepageURL}}}|[{{{HomepageURL}}} {{PAGENAME}} Website]]] | not available }}
|-
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|-
| class="InfoBoxCol" | Topics || {{ #if:{{{Topic1|}}} | *[[has topic::{{{Topic1}}}|{{{Topic1}}}]] | }}{{ #if:{{{Topic2|}}} | *[[has topic::{{{Topic2}}}|{{{Topic2}}}]] | }}{{ #if:{{{Topic3|}}} | *[[has topic::{{{Topic3}}}|{{{Topic3}}}]] | }}{{ #if:{{{Topic4|}}} | *[[has topic::{{{Topic4}}}|{{{Topic4}}}]] | }}{{ #if:{{{Topic5|}}} | *[[has topic::{{{Topic5}}}|{{{Topic5}}}]] | }}{{ #if:{{{Topic6|}}} | *[[has topic::{{{Topic6}}}|{{{Topic6}}}]] | }}{{ #if:{{{Topic7|}}} | *[[has topic::{{{Topic7}}}|{{{Topic7}}}]] | }}{{ #if:{{{Topic8|}}} | *[[has topic::{{{Topic8}}}|{{{Topic8}}}]] | }}{{ #if:{{{Topic9|}}} | *[[has topic::{{{Topic9}}}|{{{Topic9}}}]] | }}
|-
| class="InfoBoxCol" | License || {{ #if:{{{License|}}} | [[License:={{{License}}}]] | not available }}
|-
| class="InfoBoxCol" | Affiliation || {{ #if: {{{Affiliation1|}}} | *[[affiliated with::{{{Affiliation1}}}]] | not available }}{{ #if: {{{Affiliation2|}}} | *[[affiliated with::{{{Affiliation2}}}]] | }}{{ #if: {{{Affiliation3|}}} | *[[affiliated with::{{{Affiliation3}}}]] | }}{{ #if: {{{Affiliation4|}}} | *[[affiliated with::{{{Affiliation4}}}]] | }}{{ #if: {{{Affiliation5|}}} | *[[affiliated with::{{{Affiliation5}}}]] | }}{{ #if: {{{Affiliation6|}}} | *[[affiliated with::{{{Affiliation6}}}]] | }}{{ #if: {{{Affiliation7|}}} | *[[affiliated with::{{{Affiliation7}}}]] | }}{{ #if: {{{Affiliation8|}}} | *[[affiliated with::{{{Affiliation8}}}]] | }}{{ #if: {{{Affiliation9|}}} | *[[affiliated with::{{{Affiliation9}}}]] | }}
|}

<div style="width:100%;display:block;float:left;padding: 0px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:EditData/Plugin/{{PAGENAME}}|Edit this plugin]]</strong><br /><br /></center>
</div>

</div>
__NOTOC__
<div style="display:block;float:left;width:64%;margin-bottom:2em;">
[[description:={{{Description}}}]]

== Versions & Compatibility ==

This section shows available versions of [[ID:={{PAGENAME}}|{{PAGENAME}}]] and for each version its '''compatible Protégé versions''' and '''necessary plugins'''.

<ask mainlabel="Version" format="broadtable" link="all" sort="version number" order="descending" default="no version available for this plugin">
[[Category:Version]] [[version of::{{PAGENAME}}]]
[[compatible with::*|compatible with]]
[[depends on::*|necessary plugins]]
</ask>

If you add a new version of {{PAGENAME}} please adhere to this '''naming convention''' when you define a page title after clicking the link below:

<center>'''{{PAGENAME}} X.X.X'''</center>

<div style="width:100%;display:block;float:left;padding: 0px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:VersionOfPlugin|New {{PAGENAME}} Version]]</strong><br /><br /></center>
</div>

<div style="display:block;float:left;width:100%;">
== Changelog ==
<center>
<ask mainlabel="Version" format="broadtable" link="all" sort="version number" order="descending" default="no version available for this plugin">
[[Category:Version]] [[version of::{{PAGENAME}}]]
[[Changelog:=*|Changes in this version]]
</ask>
</center>
</div>

</div>

{{ #if:{{{PluginType|}}} | [[Category:{{{PluginType}}}]] | }}
[[Category:Plugin]]

</includeonly><noinclude>
{{{{FULLPAGENAME}}/doc}}

</noinclude>

Template:Plugin

2007-08-20T19:22:02Z

Markus:

<includeonly>{{PluginWikiHeader|ID={{PAGENAME}}|{{ #if:{{{DeveloperID1|}}} | Author1={{{DeveloperID1}}} }}}}<div class="PluginSidebar">{{ #if: {{{Screenshot|}}} | <p>[[Screenshot:={{{Screenshot}}}|[[Image:{{{Screenshot}}}|thumb|100%|center|Screenshot]]]]</p> | }}
{| class="PluginWikiInfoBox" cellspacing="0" cellpadding="5"
|-
| class="InfoBoxColFirst" | Type || {{ #if:{{{PluginType|}}} | [[:Category:{{{PluginType}}}|{{{PluginType}}}]] | not defined }}
|-
| class="InfoBoxCol" | Developed by || {{ #if:{{{DeveloperID1|}}} | [[developed by::{{{DeveloperID1}}}|{{{DeveloperID1}}}]] | not available }}{{ #if:{{{DeveloperID2|}}} | , [[developed by::{{{DeveloperID2}}}|{{{DeveloperID2}}}]] | }}{{ #if:{{{DeveloperID3|}}} | , [[developed by::{{{DeveloperID3}}}|{{{DeveloperID3}}}]] | }}{{ #if:{{{DeveloperID4|}}} | , [[developed by::{{{DeveloperID4}}}|{{{DeveloperID4}}}]] | }}{{ #if:{{{DeveloperID5|}}} | , [[developed by::{{{DeveloperID5}}}|{{{DeveloperID5}}}]] | }}{{ #if:{{{DeveloperID6|}}} | , [[developed by::{{{DeveloperID6}}}|{{{DeveloperID6}}}]] | }}{{ #if:{{{DeveloperID7|}}} | , [[developed by::{{{DeveloperID7}}}|{{{DeveloperID7}}}]] | }}{{ #if:{{{DeveloperID8|}}} | , [[developed by::{{{DeveloperID8}}}|{{{DeveloperID8}}}]] | }}{{ #if:{{{DeveloperID9|}}} | , [[developed by::{{{DeveloperID9}}}|{{{DeveloperID9}}}]] | }}
|-
| class="InfoBoxCol" | Last Update || {{ #if:{{{LastUpdated|}}} | [[Last update:={{{LastUpdated}}}]] | not available }}
|-
| class="InfoBoxCol" | Current Version || <ask format="template" template="CurrentVersion" limit="1" searchlabel="" sort="Version number" order="descending" default="no version available">[[Category:Version]] [[version of::{{PAGENAME}}]] [[Version number:=*]]</ask>
|-
| class="InfoBoxCol" | Homepage || {{ #if:{{{HomepageURL|}}} | [[Homepage:={{{HomepageURL}}}|[{{{HomepageURL}}} {{PAGENAME}} Website]]] | not available }}
|-
| class="InfoBoxCol" | Application || {{ #if:{{{ForApplication1|}}} | *[[for Application::{{{ForApplication1}}}|{{{ForApplication1}}}]] | }}{{ #if:{{{ForApplication2|}}} | *[[for Application::{{{ForApplication2}}}|{{{ForApplication2}}}]] | }}{{ #if:{{{ForApplication3|}}} | *[[for Application::{{{ForApplication3}}}|{{{ForApplication3}}}]] | }}
|-
| class="InfoBoxCol" | Topics || {{ #if:{{{Topic1|}}} | *[[has topic::{{{Topic1}}}|{{{Topic1}}}]] | }}{{ #if:{{{Topic2|}}} | *[[has topic::{{{Topic2}}}|{{{Topic2}}}]] | }}{{ #if:{{{Topic3|}}} | *[[has topic::{{{Topic3}}}|{{{Topic3}}}]] | }}{{ #if:{{{Topic4|}}} | *[[has topic::{{{Topic4}}}|{{{Topic4}}}]] | }}{{ #if:{{{Topic5|}}} | *[[has topic::{{{Topic5}}}|{{{Topic5}}}]] | }}{{ #if:{{{Topic6|}}} | *[[has topic::{{{Topic6}}}|{{{Topic6}}}]] | }}{{ #if:{{{Topic7|}}} | *[[has topic::{{{Topic7}}}|{{{Topic7}}}]] | }}{{ #if:{{{Topic8|}}} | *[[has topic::{{{Topic8}}}|{{{Topic8}}}]] | }}{{ #if:{{{Topic9|}}} | *[[has topic::{{{Topic9}}}|{{{Topic9}}}]] | }}
|-
| class="InfoBoxCol" | License || {{ #if:{{{License|}}} | [[License:={{{License}}}]] | not available }}
|-
| class="InfoBoxCol" | Affiliation || {{ #if: {{{Affiliation1|}}} | *[[affiliated with::{{{Affiliation1}}}]] | not available }}{{ #if: {{{Affiliation2|}}} | *[[affiliated with::{{{Affiliation2}}}]] | }}{{ #if: {{{Affiliation3|}}} | *[[affiliated with::{{{Affiliation3}}}]] | }}{{ #if: {{{Affiliation4|}}} | *[[affiliated with::{{{Affiliation4}}}]] | }}{{ #if: {{{Affiliation5|}}} | *[[affiliated with::{{{Affiliation5}}}]] | }}{{ #if: {{{Affiliation6|}}} | *[[affiliated with::{{{Affiliation6}}}]] | }}{{ #if: {{{Affiliation7|}}} | *[[affiliated with::{{{Affiliation7}}}]] | }}{{ #if: {{{Affiliation8|}}} | *[[affiliated with::{{{Affiliation8}}}]] | }}{{ #if: {{{Affiliation9|}}} | *[[affiliated with::{{{Affiliation9}}}]] | }}
|}

<div style="width:100%;display:block;float:left;padding: 0px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:EditData/Plugin/{{PAGENAME}}|Edit this plugin]]</strong><br /><br /></center>
</div>

</div>

<div style="display:block;float:left;width:64%;margin-bottom:2em;">
[[description:={{{Description}}}]]

== Versions & Compatibility ==

This section shows available versions of [[ID:={{PAGENAME}}|{{PAGENAME}}]] and for each version its '''compatible Protégé versions''' and '''necessary plugins'''.

<ask mainlabel="Version" format="broadtable" link="all" sort="version number" order="descending" default="no version available for this plugin">
[[Category:Version]] [[version of::{{PAGENAME}}]]
[[compatible with::*|compatible with]]
[[depends on::*|necessary plugins]]
</ask>

If you add a new version of {{PAGENAME}} please adhere to this '''naming convention''' when you define a page title after clicking the link below:

<center>'''{{PAGENAME}} X.X.X'''</center>

<div style="width:100%;display:block;float:left;padding: 0px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:VersionOfPlugin|New {{PAGENAME}} Version]]</strong><br /><br /></center>
</div>

<div style="display:block;float:left;width:100%;">
== Changelog ==
<center>
<ask mainlabel="Version" format="broadtable" link="all" sort="version number" order="descending" default="no version available for this plugin">
[[Category:Version]] [[version of::{{PAGENAME}}]]
[[Changelog:=*|Changes in this version]]
</ask>
</center>
</div>

</div>

{{ #if:{{{PluginType|}}} | [[Category:{{{PluginType}}}]] | }}
[[Category:Plugin]]

</includeonly><noinclude>
{{{{FULLPAGENAME}}/doc}}

</noinclude>

Form:VersionOfPlugin

2007-08-20T19:21:41Z

Markus:

<noinclude>
This is the 'VersionOfPlugin' form; edit the page to see the source code. You can add data with this form [[Special:AddPage/Form:VersionOfPlugin|here]].
</noinclude>
<includeonly>
<h2>VersionOfPlugin: {{{field|page title}}}</h2>

<p>Please provide information about this plugin version in the form below.
<br />
</p>

{{{for template|VersionOfPlugin}}}

<table border="0" cellpadding="5" cellspacing="10">
<tr style="background:#e6ffcc;">
<td valign="top" align="right"><strong>Plugin:</strong></td> <td valign="top">{{{field|VersionOf}}}</td>
<td style="background:#ff6666;">ID of plugin this version is for.<br />MUST BE THE SAME AS IN PAGE TITLE</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Version number:</strong></td> <td>{{{field|Number}}}</td>
<td style="background:#ff6666;">Number of this version.<br />SHOULD BE THE SAME AS IN PAGE TITLE</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Last update:</strong></td> <td>{{{field|LastUpdate}}}</td>
<td>Date on which this version was released.</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Download URL:</strong></td> <td>{{{field|File}}}</td>
<td>URL to download page.</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Compatibility:</strong></td> <td>{{{field|CompatibleWith1}}}</td>
<td rowspan="9" valign="middle">Up to 9 versions of Protege flavors this plugin version is compatible with can be given, e.g.
<ul>
<li>Protege-Frames 3.1.1</li>
<li>Protege-OWL 3.2.1</li>
<li>Protege Client/Server 3.3.1</li>
</ul></td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Compatibility:</strong></td> <td>{{{field|CompatibleWith2}}}</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Compatibility:</strong></td> <td>{{{field|CompatibleWith3}}}</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Compatibility:</strong></td> <td>{{{field|CompatibleWith4}}}</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Compatibility:</strong></td> <td>{{{field|CompatibleWith5}}}</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Compatibility:</strong></td> <td>{{{field|CompatibleWith6}}}</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Compatibility:</strong></td> <td>{{{field|CompatibleWith7}}}</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Compatibility:</strong></td> <td>{{{field|CompatibleWith8}}}</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Compatibility:</strong></td> <td>{{{field|CompatibleWith9}}}</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Dependency:</strong></td> <td>{{{field|DependsOn1}}}</td>
<td rowspan="9" valign="middle">Up to 9 other plugins which are necessary to run this version.</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Dependency:</strong></td> <td>{{{field|DependsOn2}}}</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Dependency:</strong></td> <td>{{{field|DependsOn3}}}</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Dependency:</strong></td> <td>{{{field|DependsOn4}}}</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Dependency:</strong></td> <td>{{{field|DependsOn5}}}</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Dependency:</strong></td> <td>{{{field|DependsOn6}}}</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Dependency:</strong></td> <td>{{{field|DependsOn7}}}</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Dependency:</strong></td> <td>{{{field|DependsOn8}}}</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Dependency:</strong></td> <td>{{{field|DependsOn9}}}</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Changelog:</strong></td> <td>{{{field|Changelog|default=see page for more details}}}</td>
<td>A short description of changes in this version.</td>
</tr>

</table>

{{{end template}}}

<fieldset><legend>More details</legend>
<p>You can add more information here and use standard MediaWiki formatting options.</p>
{{{field|free text}}}
</fieldset>
</includeonly>

Form:Plugin

2007-08-20T19:21:25Z

Markus:

<noinclude>
This is the 'Plugin' form; edit the page to see the source code. You can add data with this form [[Special:AddPage/Form:Plugin|here]].
</noinclude>
<includeonly>
<h2>Plugin: {{{field|page title}}}</h2>

<p>Please provide information about a plugin in the form below.
<br />
</p>

{{{for template|Plugin}}}

<table border="0" cellpadding="5" cellspacing="10">
<tr style="background:#D1FFA4;border:1px solid #B0FF5C;">
<td valign="top" align="right"><strong>Type:</strong></td> <td valign="top">{{{field|PluginType}}}</td>
<td>Plugins can be of type:
<ul>
<li>API</li>
<li>Tab Widget</li>
<li>Slot Widget</li>
<li>Backend</li>
<li>Project</li>
<li>Import Export</li>
</ul>
</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>works with:</strong></td> <td>{{{field|ForApplication1}}}</td>
<td rowspan="3" valign="middle">Plugins can work with up to 3 flavors of Protege:
<ul>
<li>Protege-Frames</li>
<li>Protege-OWL</li>
<li>Protege Client/Server</li>
</ul></td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>works with::</strong></td> <td>{{{field|ForApplication2}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>works with::</strong></td> <td>{{{field|ForApplication3}}}</td>
</tr>
<tr style="background:#D1FFA4;border:1px solid #B0FF5C;">
<td align="right"><strong>Screenshot:</strong></td> <td>{{{field|Screenshot}}}</td>
<td>Filename of an already uploaded file.</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>ID of developer:</strong></td> <td>{{{field|DeveloperID1}}}</td>
<td rowspan="9" valign="middle">Up to 9 developers can be added here.</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>ID of developer:</strong></td> <td>{{{field|DeveloperID2}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>ID of developer:</strong></td> <td>{{{field|DeveloperID3}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>ID of developer:</strong></td> <td>{{{field|DeveloperID4}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>ID of developer:</strong></td> <td>{{{field|DeveloperID5}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>ID of developer:</strong></td> <td>{{{field|DeveloperID6}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>ID of developer:</strong></td> <td>{{{field|DeveloperID7}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>ID of developer:</strong></td> <td>{{{field|DeveloperID8}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>ID of developer:</strong></td> <td>{{{field|DeveloperID9}}}</td>
</tr>
<tr style="background:#D1FFA4;border:1px solid #B0FF5C;">
<td align="right"><strong>Last updated:</strong></td> <td>{{{field|LastUpdated}}}</td>
<td>Date of last changes, updates or new versions.</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Topic:</strong></td> <td>{{{field|Topic1}}}</td>
<td rowspan="9" valign="middle">Up to 9 topics can be added here.<br />Available topics are:
<ul>
<li>Database</li>
<li>Editor</li>
<li>Export</li>
<li>Import</li>
<li>Inference</li>
<li>Project Management</li>
<li>Reasoning</li>
<li>Terminologies</li>
<li>Validation</li>
<li>Visualization</li>
<li>...</li>
</ul>
</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Topic:</strong></td> <td>{{{field|Topic2}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Topic:</strong></td> <td>{{{field|Topic3}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Topic:</strong></td> <td>{{{field|Topic4}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Topic:</strong></td> <td>{{{field|Topic5}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Topic:</strong></td> <td>{{{field|Topic6}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Topic:</strong></td> <td>{{{field|Topic7}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Topic:</strong></td> <td>{{{field|Topic8}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Topic:</strong></td> <td>{{{field|Topic9}}}</td>
</tr>
<tr style="background:#D1FFA4;border:1px solid #B0FF5C;">
<td align="right"><strong>License:</strong></td> <td>{{{field|License}}}</td>
<td>License for plugin and/or source code.</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Affiliation:</strong></td> <td>{{{field|Affiliation1}}}</td>
<td rowspan="9" valign="middle">Up to 9 affiliations can be added here.</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Affiliation:</strong></td> <td>{{{field|Affiliation2}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Affiliation:</strong></td> <td>{{{field|Affiliation3}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Affiliation:</strong></td> <td>{{{field|Affiliation4}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Affiliation:</strong></td> <td>{{{field|Affiliation5}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Affiliation:</strong></td> <td>{{{field|Affiliation6}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Affiliation:</strong></td> <td>{{{field|Affiliation7}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Affiliation:</strong></td> <td>{{{field|Affiliation8}}}</td>
</tr>
<tr style="background:#e6ffcc;border:1px solid #B0FF5C;">
<td align="right"><strong>Affiliation:</strong></td> <td>{{{field|Affiliation9}}}</td>
</tr>
<tr style="background:#D1FFA4;border:1px solid #B0FF5C;">
<td align="right"><strong>Description:</strong></td> <td>{{{field|Description}}}</td>
<td>A short description.</td>
</tr>

</table>

{{{end template}}}

<fieldset><legend>More details</legend>
<p>You can add more information here and use standard MediaWiki formatting options.</p>
{{{field|free text}}}
</fieldset>
</includeonly>

Template:VersionOfApplication

2007-08-20T19:20:15Z

Markus:

<includeonly>{{PluginWikiHeader|ID={{{VersionOf}}} {{{Number}}}}}
<div class="PluginSidebar">
{| class="PluginWikiInfoBox" cellspacing="0" cellpadding="5"
|-
| class="InfoBoxColFirst" | Version || {{ #if:{{{Number|}}} | [[Version number:={{{Number}}}]] | not available }}
|-
| class="InfoBoxCol" | Application || {{ #if:{{{VersionOf}}} | [[Version of::{{{VersionOf}}}]] | not available }}
|-
| class="InfoBoxCol" | Last update || {{ #if:{{{LastUpdate}}} | [[Last update:={{{LastUpdate}}}]] | not available }}
|-
| class="InfoBoxCol" | Download || {{ #if:{{{File|}}} | [[Version file:={{{File}}}|[{{{File}}} {{{VersionOf}}} {{{Number}}}]]] | not available }}
|}

<div style="width:100%;display:block;float:left;padding: 0px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:EditData/VersionOf{{{VersionOf}}}/{{PAGENAME}}|Edit this version]]</strong><br /><br /></center>
</div>

</div>

<div style="display:block;float:left;width:64%;margin:0 0 2em 0;">
== Version & Dependency of compatible Plugins ==
This section shows all plugins which are compatible with this version of {{PAGENAME}}. It also lists plugins these compatible plugins depend on.

<ask format="broadtable" link="all" default="no plugin versions are compatible with this application version">
[[Category:Version]] [[compatible with::{{PAGENAME}}]] [[depends on::*]]
</ask>

{{ #if:{{{Changelog|}}} | == Changelog ==

[[Changelog:={{{Changelog}}}]] | == Changelog ==

no information about changes }}

</div>

[[Category:VersionOfApplication]]

</includeonly><noinclude>
{{{{FULLPAGENAME}}/doc}}
</noinclude>

Template:VersionOfApplication

2007-08-20T19:19:45Z

Markus:

<includeonly>{{PluginWikiHeader|ID={{{VersionOf}}} {{{Number}}}}}
<div class="PluginSidebar">
{| class="PluginWikiInfoBox" cellspacing="0" cellpadding="5"
|-
| class="InfoBoxColFirst" | Version || {{ #if:{{{Number|}}} | [[Version number:={{{Number}}}]] | not available }}
|-
| class="InfoBoxCol" | Application || {{ #if:{{{VersionFor}}} | [[Version of::{{{VersionOf}}}]] | not available }}
|-
| class="InfoBoxCol" | Last update || {{ #if:{{{LastUpdate}}} | [[Last update:={{{LastUpdate}}}]] | not available }}
|-
| class="InfoBoxCol" | Download || {{ #if:{{{File|}}} | [[Version file:={{{File}}}|[{{{File}}} {{{VersionOf}}} {{{Number}}}]]] | not available }}
|}

<div style="width:100%;display:block;float:left;padding: 0px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:EditData/VersionOf{{{VersionFor}}}/{{PAGENAME}}|Edit this version]]</strong><br /><br /></center>
</div>

</div>

<div style="display:block;float:left;width:64%;margin:0 0 2em 0;">
== Version & Dependency of compatible Plugins ==
This section shows all plugins which are compatible with this version of {{PAGENAME}}. It also lists plugins these compatible plugins depend on.

<ask format="broadtable" link="all" default="no plugin versions are compatible with this application version">
[[Category:Version]] [[compatible with::{{PAGENAME}}]] [[depends on::*]]
</ask>

{{ #if:{{{Changelog|}}} | == Changelog ==

[[Changelog:={{{Changelog}}}]] | == Changelog ==

no information about changes }}

</div>

[[Category:VersionOfApplication]]

</includeonly><noinclude>
{{{{FULLPAGENAME}}/doc}}
</noinclude>

Template:Application

2007-08-20T19:16:54Z

Markus:

<includeonly>{{PluginWikiHeader|ID={{{ApplicationID}}}|{{ #if:{{{DevelopedBy1|}}} | Author1={{{DevelopedBy1}}} }}}}
<div style="display:block;float:left;width:100%;">
<div class="PluginSidebar">{{ #if: {{{Screenshot|}}} | <p>[[screenshot:={{{Screenshot}}}|[[Image:{{{Screenshot}}}|thumb|100%|center|Screenshot]]]]</p> | }}
{| cellspacing="0" cellpadding="5" class="PluginWikiInfoBox"
|-
| class="InfoBoxColFirst" | Developed by: || {{ #if:{{{DevelopedBy1|}}} | [[developed by::{{{DevelopedBy1}}}]] | not available }}
|-
| class="InfoBoxCol" | Last Update: || {{ #if:{{{LastUpdate|}}} | [[Last update:={{{LastUpdate}}}]] | notavailable }}
|-
| class="InfoBoxCol" | Current Version: || <ask format="template" template="CurrentVersion" limit="1" searchlabel="" sort="version number" order="descending" default="no version available">[[Category:Version]] [[version of::{{PAGENAME}}]] [[Version number:=*]]</ask>
|-
| class="InfoBoxCol" | Homepage: || {{ #if:{{{HomepageURL|}}} | [[Homepage:={{{HomepageURL}}}|[{{{HomepageURL}}} {{{ApplicationID}}} Website]]] | not available }}
|-
| class="InfoBoxCol" | Affiliation: || {{ #if:{{{Affiliation1|}}} | *[[affiliated to::{{{Affiliation1}}}]] | not available }}{{ #if:{{{Affiliation2|}}} | *[[affiliated to::{{{Affiliation2}}}]] | }}
{{ #if:{{{Affiliation3|}}} | *[[affiliated to::{{{Affiliation3}}}]] | }}{{ #if:{{{Affiliation4|}}} | *[[affiliated to::{{{Affiliation4}}}]] | }}{{ #if:{{{Affiliation5|}}} | *[[affiliated to::{{{Affiliation5}}}]] | }}{{ #if:{{{Affiliation6|}}} | *[[affiliated to::{{{Affiliation6}}}]] | }}{{ #if:{{{Affiliation7|}}} | *[[affiliated to::{{{Affiliation7}}}]] | }}{{ #if:{{{Affiliation8|}}} | *[[affiliated to::{{{Affiliation8}}}]] | }}{{ #if:{{{Affiliation9|}}} | *[[affiliated to::{{{Affiliation9}}}]] | }}
|}
</div>

<div style="display:block;float:left;width:64%;margin:0 0 2em 0;">
__NOTOC__

[[Description:={{{Description}}}]]

== Plugins for {{PAGENAME}} ==

This section shows available plugins for [[ID:={{{ApplicationID}}}|{{{ApplicationID}}}]] and topics for each of these plugins.

<ask format="broadtable" default="no plugins available">
[[Category:Plugin]] [[for application::{{PAGENAME}}]] [[has topic::*]]
</ask>

<div style="width:100%;display:block;float:left;padding: 10px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:Plugin|New Plugin]]</strong><br /><br /></center>
</div>

== Versions of {{PAGENAME}} ==

This section shows available versions of {{{ApplicationID}}} and changes in each version.

<ask format="broadtable" sort="version number" order="descending" default="no version available for this application">
[[Category:Version]] [[version of::{{PAGENAME}}]]
[[Changelog:=*|Changelog]]
</ask>

<div style="width:100%;display:block;float:left;padding: 10px 0px 0px 0px;">
<center><br /><strong style="padding:5px;background:#B0FF5C;">[[Special:AddPage/Form:VersionOf{{PAGENAME}}|New {{PAGENAME}} Version]]</strong><br /><br /></center>
</div>

</div>
</div>

[[Category:Application]]

</includeonly><noinclude>
{{{{FULLPAGENAME}}/doc}}
</noinclude>

Protege-OWL

2007-08-20T19:15:49Z

Markus:

{{Application|
ApplicationID=Protege-OWL|
Screenshot=Protege-OWL.jpg|
DevelopedBy1=Stanford Medical Informatics|
LastUpdate=07/06/2007|
HomepageURL=http://protege.stanford.edu/|
Affiliation1=Stanford Medical Informatics|
Affiliation2=Stanford University|
Description=The Protege-OWL editor is an extension of Protege that supports the Web Ontology Language (OWL).}}

<div>
== More Details ==

OWL is the most recent development in standard ontology languages, endorsed by the [http://www.w3.org/ World Wide Web Consortium (W3C)] to promote the [http://www.sciam.com/article.cfm?articleID=00048144-10D2-1C70-84A9809EC588EF21&ref=sciam Semantic Web vision]. "An OWL ontology may include descriptions of classes, properties and their instances. Given such an ontology, the OWL formal semantics specifies how to derive its logical consequences, i.e. facts not literally present in the ontology, but entailed by the semantics. These entailments may be based on a single document or multiple distributed documents that have been combined using defined OWL mechanisms" (see the [http://www.w3.org/TR/owl-guide/ OWL Web Ontology Language Guide]).

== Features ==

The Protege-OWL editor enables users to:

* Load and save OWL and RDF ontologies.
* Edit and visualize classes, properties and [http://www.w3.org/Submission/SWRL/ SWRL] rules.
* Define logical class characteristics as OWL expressions.
* Execute reasoners such as description logic classifiers.
* Edit OWL individuals for Semantic Web markup.

Protege-OWL's flexible architecture makes it easy to configure and extend the tool. Protege-OWL is [http://protege.stanford.edu/plugins/owl/jena-integration.html tightly integrated with Jena] and has an [http://protege.stanford.edu/plugins/owl/api/index.html open-source Java API] for the development of custom-tailored user interface components or arbitrary Semantic Web services.

== Documentation==

Further documentation about Protege-OWL is available in the [http://protege.stanford.edu/plugins/owl/documentation.html documentation section] of the Protege-OWL Web site, including the popular [http://www.co-ode.org/resources/tutorials/ProtegeOWLTutorial.pdf Protege OWL Tutorial] and the [http://protege.stanford.edu/plugins/owl/protege-owl-faq.html Protege-OWL FAQ].

== Screenshots ==

View [http://protege.stanford.edu/overview/po-screenshots.html screenshots] of Protege-OWL.

== Example Ontologies ==

Browse examples of [http://protege.stanford.edu/plugins/owl/owl-library/index.html ontologies] created in OWL.

</div>

Protege-Frames

2007-08-20T19:15:18Z

Markus:

{{Application|
ApplicationID=Protege-Frames|
Screenshot=Protege-Frames.jpg|
DevelopedBy1=Stanford Medical Informatics|
LastUpdate=07/06/2007|
HomepageURL=http://protege.stanford.edu/|
Affiliation1=Stanford Medical Informatics|
Affiliation2=Stanford University|
Description=The Protege-Frames editor provides a full-fledged user interface and knowledge server to support users in constructing and storing frame-based domain ontologies, customizing data entry forms, and entering instance data.}}

<div>
== More Details ==

Protege-Frames implements a knowledge model which is compatible with the [http://www.ai.sri.com/~okbc/ Open Knowledge Base Connectivity protocol (OKBC)]]. In this model, an ontology consists of a set of classes organized in a subsumption hierarchy to represent a domain’s salient concepts, a set of slots associated to classes to describe their properties and relationships, and a set of instances of those classes - individual exemplars of the concepts that hold specific values for their properties.

== Features ==

Features of Protege-Frames include:

*A wide set of user interface elements that can be customized to enable users to model knowledge and enter data in domain-friendly forms.
*A [http://protege.stanford.edu/doc/dev.html plug-in architecture] that can be extended with custom-designed elements, such as graphical components (e.g., graphs and tables), media (e.g., sound, images, and video), various storage formats (e.g., [http://www.w3.org/RDF RDF], [http://www.w3.org/XML/ XML], [http://www.w3.org/MarkUp/ HTML], and database back-ends), and [http://protege.stanford.edu/download/plugins.html additional support tools] (e.g., for ontology management, ontology visualization, inference and reasoning, etc.).
*A [http://protege.stanford.edu/doc/dev.html Java-based Application Programming Interface (API)] that makes it possible for plug-ins and other applications to access, use, and display ontologies created with Protege-Frames.

== Documentation==

Further documentation about Protege-Frames can be found in the [http://protege.stanford.edu/doc/users.html documentation] section of our Web site, including the popular [http://protege.stanford.edu/publications/ontology_development/ontology101.html Ontology Development 101] guide to building a frame-based ontology, the Protégé-Frames [http://protege.stanford.edu/doc/users_guide/index.html User's Guide], and the [http://protege.stanford.edu/doc/faq.html Protege-Frames FAQ].

== Screenshots ==

View [http://protege.stanford.edu/overview/pf-screenshots.html screenshots] of Protege-Frames.

== Demo Applets ==

View [http://protege.stanford.edu/overview/applets.html applet demos] of Protege-Frames.

== Example Ontologies ==

Browse examples of [http://protege.stanford.edu/download/ontologies.html ontologies] built with Protege-Frames.

</div>

Protege Client-Server

2007-08-20T19:14:50Z

Markus: 1 revision(s)

{{Application|
ApplicationID=Protege Client/Server|
Screenshot=protege-clientserver.jpg|
DevelopedBy1=Stanford Medical Informatics|
LastUpdate=07/06/2007|
HomepageURL=http://protege.stanford.edu/|
Affiliation1=Stanford Medical Informatics|
Affiliation2=Stanford University|
Description=Protege Client/Server is ...}}

<div>

enter more information here

</div>

Form:VersionOfProtege-Frames

2007-08-20T19:14:50Z

Markus: 1 revision(s)

<noinclude>
This is the 'VersionOfProtege Client/Server' form; edit the page to see the source code. You can add data with this form [[Special:AddPage/Form:VersionOfProtege_Client/Server|here]].
</noinclude>
<includeonly>
<h2>Version Of Protege Client/Server: {{{field|page title}}}</h2>

<p>Please provide information about this version of Protege Client/Server in the form below.
<br />
</p>

{{{for template|VersionOfApplication}}}

<table border="0" cellpadding="5" cellspacing="10">
<tr style="background:#e6ffcc;">
<td valign="top" align="right"><strong>Application:</strong></td> <td valign="top">{{{field|VersionOf|default=Protege Client/Server}}}</td>
<td style="background:#ff6666;">DO NOT CHANGE THIS!</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Version number:</strong></td> <td>{{{field|Number}}}</td>
<td style="background:#ff6666;">Number for this version.<br />SHOULD BE THE SAME AS IN PAGE TITLE</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Last update:</strong></td> <td>{{{field|LastUpdate}}}</td>
<td>Date on which this version was released.</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Download URL:</strong></td> <td>{{{field|File}}}</td>
<td>Link to download page.</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Changelog:</strong></td> <td>{{{field|Changelog|default=see page for more details}}}</td>
<td>A short description of changes in this version.</td>
</tr>

</table>

{{{end template}}}

<fieldset><legend>More details</legend>
<p>You can add more information here and use standard MediaWiki formatting options.</p>
{{{field|free text}}}
</fieldset>

</includeonly>

Form:VersionOfProtege-OWL

2007-08-20T19:14:50Z

Markus: 1 revision(s)

<noinclude>
This is the 'VersionOfProtege-OWL' form; edit the page to see the source code. You can add data with this form [[Special:AddPage/Form:VersionOfProtege-OWL|here]].
</noinclude>
<includeonly>
<h2>Version Of Protege-OWL: {{{field|page title}}}</h2>

<p>Please provide information about this version of Protege-OWL in the form below.
<br />
</p>

{{{for template|VersionOfApplication}}}

<table border="0" cellpadding="5" cellspacing="10">
<tr style="background:#e6ffcc;">
<td valign="top" align="right"><strong>Application:</strong></td> <td valign="top">{{{field|VersionOf|default=Protege-OWL}}}</td>
<td style="background:#ff6666;">DO NOT CHANGE THIS!</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Version number:</strong></td> <td>{{{field|Number}}}</td>
<td style="background:#ff6666;">Number for this version.<br />SHOULD BE THE SAME AS IN PAGE TITLE</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Last update:</strong></td> <td>{{{field|LastUpdate}}}</td>
<td>Date on which this version was released.</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Download URL:</strong></td> <td>{{{field|File}}}</td>
<td>Link to download page.</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Changelog:</strong></td> <td>{{{field|Changelog|default=see page for more details}}}</td>
<td>A short description of changes in this version.</td>
</tr>

</table>

{{{end template}}}

<fieldset><legend>More details</legend>
<p>You can add more information here and use standard MediaWiki formatting options.</p>
{{{field|free text}}}
</fieldset>

</includeonly>

Form:VersionOfProtege Client-Server

2007-08-20T19:14:50Z

Markus: 1 revision(s)

<noinclude>
This is the 'VersionOfProtege Client/Server' form; edit the page to see the source code. You can add data with this form [[Special:AddPage/Form:VersionOfProtege Client/Server|here]].
</noinclude>
<includeonly>
<h2>Version Of Protege Client/Server: {{{field|page title}}}</h2>

<p>Please provide information about this version of Protege Client/Server in the form below.
<br />
</p>

{{{for template|VersionOfApplication}}}

<table border="0" cellpadding="5" cellspacing="10">
<tr style="background:#e6ffcc;">
<td valign="top" align="right"><strong>Application:</strong></td> <td valign="top">{{{field|VersionOf|default=Protege Client/Server}}}</td>
<td style="background:#ff6666;">DO NOT CHANGE THIS!</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Version number:</strong></td> <td>{{{field|Number}}}</td>
<td style="background:#ff6666;">Number for this version.<br />SHOULD BE THE SAME AS IN PAGE TITLE</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Last update:</strong></td> <td>{{{field|LastUpdate}}}</td>
<td>Date on which this version was released.</td>
</tr>
<tr style="background:#D1FFA4;">
<td align="right"><strong>Download URL:</strong></td> <td>{{{field|File}}}</td>
<td>Link to download page.</td>
</tr>
<tr style="background:#e6ffcc;">
<td align="right"><strong>Changelog:</strong></td> <td>{{{field|Changelog|default=see page for more details}}}</td>
<td>A short description of changes in this version.</td>
</tr>

</table>

{{{end template}}}

<fieldset><legend>More details</legend>
<p>You can add more information here and use standard MediaWiki formatting options.</p>
{{{field|free text}}}
</fieldset>

</includeonly>

Protege-Frames 3.0

2007-08-20T19:14:49Z

Markus: 1 revision(s)

{{VersionOfApplication
|VersionOf=Protege-Frames
|Number=3.0
|LastUpdate=June 27, 2006
|File=http://protege.stanford.edu/download/old-releases/3.0/
|Changelog=http://protege.stanford.edu/download/old-releases/3.0/release_notes_3.0.html
}}

Protege-Frames 3.1.1

2007-08-20T19:14:49Z

Markus: 1 revision(s)

{{VersionOfApplication
|VersionOf=Protege-Frames
|Number=3.1.1
|LastUpdate=November 01, 2006
|File=http://protege.stanford.edu/download/old-releases/3.1.1/
|Changelog=http://protege.stanford.edu/download/old-releases/3.1.1/release-notes-3.1.1.html
}}

Protege-Frames 3.2.1

2007-08-20T19:14:49Z

Markus: 1 revision(s)

{{VersionOfApplication
|VersionOf=Protege-Frames
|Number=3.2.1
|LastUpdate=January 29, 2007
|File=http://protege.stanford.edu/download/old-releases/3.2.1/
|Changelog=http://protege.stanford.edu/download/old-releases/3.2.1/release-notes-3.2.1.html
}}

Protege-OWL

2007-08-20T19:14:49Z

Markus: 1 revision(s)

{{Application|
ApplicationID=Protege-OWL|
Screenshot=protege-owl.jpg|
DevelopedBy1=Stanford Medical Informatics|
LastUpdate=07/06/2007|
HomepageURL=http://protege.stanford.edu/|
Affiliation1=Stanford Medical Informatics|
Affiliation2=Stanford University|
Description=The Protege-OWL editor is an extension of Protege that supports the Web Ontology Language (OWL).}}

<div>
== More Details ==

OWL is the most recent development in standard ontology languages, endorsed by the [http://www.w3.org/ World Wide Web Consortium (W3C)] to promote the [http://www.sciam.com/article.cfm?articleID=00048144-10D2-1C70-84A9809EC588EF21&ref=sciam Semantic Web vision]. "An OWL ontology may include descriptions of classes, properties and their instances. Given such an ontology, the OWL formal semantics specifies how to derive its logical consequences, i.e. facts not literally present in the ontology, but entailed by the semantics. These entailments may be based on a single document or multiple distributed documents that have been combined using defined OWL mechanisms" (see the [http://www.w3.org/TR/owl-guide/ OWL Web Ontology Language Guide]).

== Features ==

The Protege-OWL editor enables users to:

* Load and save OWL and RDF ontologies.
* Edit and visualize classes, properties and [http://www.w3.org/Submission/SWRL/ SWRL] rules.
* Define logical class characteristics as OWL expressions.
* Execute reasoners such as description logic classifiers.
* Edit OWL individuals for Semantic Web markup.

Protege-OWL's flexible architecture makes it easy to configure and extend the tool. Protege-OWL is [http://protege.stanford.edu/plugins/owl/jena-integration.html tightly integrated with Jena] and has an [http://protege.stanford.edu/plugins/owl/api/index.html open-source Java API] for the development of custom-tailored user interface components or arbitrary Semantic Web services.

== Documentation==

Further documentation about Protege-OWL is available in the [http://protege.stanford.edu/plugins/owl/documentation.html documentation section] of the Protege-OWL Web site, including the popular [http://www.co-ode.org/resources/tutorials/ProtegeOWLTutorial.pdf Protege OWL Tutorial] and the [http://protege.stanford.edu/plugins/owl/protege-owl-faq.html Protege-OWL FAQ].

== Screenshots ==

View [http://protege.stanford.edu/overview/po-screenshots.html screenshots] of Protege-OWL.

== Example Ontologies ==

Browse examples of [http://protege.stanford.edu/plugins/owl/owl-library/index.html ontologies] created in OWL.

</div>

Protege-OWL 2.1.2

2007-08-20T19:14:49Z

Markus: 1 revision(s)

{{VersionOfApplication
|VersionOf=Protege-OWL
|Number=2.1.2
|LastUpdate=June 27, 2006
|File=http://protege.stanford.edu/download/old-releases/2.1.2/
|Changelog=http://protege.stanford.edu/download/old-releases/2.1.2/release_notes_2.1.2.html
}}

Protege-OWL 3.0

2007-08-20T19:14:49Z

Markus: 1 revision(s)

{{VersionOfApplication
|VersionOf=Protege-OWL
|Number=3.0
|LastUpdate=June 27, 2006
|File=http://protege.stanford.edu/download/old-releases/3.0/
|Changelog=http://protege.stanford.edu/download/old-releases/3.0/release_notes_3.0.html
}}

Protege-OWL 3.1.1

2007-08-20T19:14:49Z

Markus: 1 revision(s)

{{VersionOfApplication
|VersionOf=Protege-OWL
|Number=3.1.1
|LastUpdate=November 4, 2006
|File=http://protege.stanford.edu/download/old-releases/3.1.1/
|Changelog=http://protege.stanford.edu/download/old-releases/3.1.1/release-notes-3.1.1.html
}}

Protege-OWL 3.2.1

2007-08-20T19:14:49Z

Markus: 1 revision(s)

{{VersionOfApplication
|VersionOf=Protege-OWL
|Number=3.2.1
|LastUpdate=January 29, 2007
|File=http://protege.stanford.edu/download/old-releases/3.2.1/
|Changelog=http://protege.stanford.edu/download/old-releases/3.2.1/release-notes-3.2.1.html
}}

Protege

2007-08-20T19:14:48Z

Markus: 1 revision(s)

{{PluginWikiHeader|ID=Protege|Author1=Stanford Medical Informatics}}
<div style="display:block; float:left; width:100%;">
<div class="PluginSidebar"> <p>[[screenshot:=ProtegeLogo.gif|[[Image:ProtegeLogo.gif|thumb|100%|center|Logo]]]]</p>

{| cellspacing="0" cellpadding="5" class="PluginWikiInfoBox"
|-
| class="InfoBoxColFirst" | Developed by: || [[developed by::Stanford Medical Informatics]]
|-
| class="InfoBoxCol" | Last Update: || [[Last update:=07/06/2007]]
|-
| class="InfoBoxCol" | Current Version: || <ask format="template" template="CurrentVersion" limit="1" searchlabel="" sort="version number" order="descending" default="no version available">[[Category:Version]] [[version of::Protege-Frames||Protege-OWL||Protege Client/Server]] [[Version number:=*]]</ask>
|-
| class="InfoBoxCol" | Homepage: || [[Homepage:=http://protege.stanford.edu/|[http://protege.stanford.edu/ Protege Website]]]
|-
| class="InfoBoxCol" | Affiliation: ||
*[[affiliated to::Stanford Medical Informatics]]
*[[affiliated to::Stanford University]]
|}
</div>

<div style="display:block; float:left; width:64%;">
[[Description:=Protege is a free, open source ontology editor and knowledge-base framework. It was developed by Stanford Medical Informatics at the Stanford University School of Medicine.]]

The Protege platform supports two main ways of modeling ontologies via the [[Protege-Frames]] and [[Protege-OWL]] editors. Protege ontologies can be exported into a variety of formats including RDF(S), OWL, and XML Schema.

There is another flavor of Protege which is called [[Protege Client/Server]]...

Protege is based on Java, is extensible, and provides a plug-and-play environment that makes it a flexible base for rapid prototyping and application development.

Protege is supported by a strong community of developers and academic, government and corporate users, who are using Protege for knowledge solutions in areas as diverse as biomedicine, intelligence gathering, and corporate modeling.

</div>

</div>

[[Category:Application]]

Protege-Frames

2007-08-20T19:14:48Z

Markus: 1 revision(s)

{{Application|
ApplicationID=Protege-Frames|
Screenshot=protege-frames.jpg|
DevelopedBy1=Stanford Medical Informatics|
LastUpdate=07/06/2007|
HomepageURL=http://protege.stanford.edu/|
Affiliation1=Stanford Medical Informatics|
Affiliation2=Stanford University|
Description=The Protege-Frames editor provides a full-fledged user interface and knowledge server to support users in constructing and storing frame-based domain ontologies, customizing data entry forms, and entering instance data.}}

<div>
== More Details ==

Protege-Frames implements a knowledge model which is compatible with the [http://www.ai.sri.com/~okbc/ Open Knowledge Base Connectivity protocol (OKBC)]]. In this model, an ontology consists of a set of classes organized in a subsumption hierarchy to represent a domain’s salient concepts, a set of slots associated to classes to describe their properties and relationships, and a set of instances of those classes - individual exemplars of the concepts that hold specific values for their properties.

== Features ==

Features of Protege-Frames include:

*A wide set of user interface elements that can be customized to enable users to model knowledge and enter data in domain-friendly forms.
*A [http://protege.stanford.edu/doc/dev.html plug-in architecture] that can be extended with custom-designed elements, such as graphical components (e.g., graphs and tables), media (e.g., sound, images, and video), various storage formats (e.g., [http://www.w3.org/RDF RDF], [http://www.w3.org/XML/ XML], [http://www.w3.org/MarkUp/ HTML], and database back-ends), and [http://protege.stanford.edu/download/plugins.html additional support tools] (e.g., for ontology management, ontology visualization, inference and reasoning, etc.).
*A [http://protege.stanford.edu/doc/dev.html Java-based Application Programming Interface (API)] that makes it possible for plug-ins and other applications to access, use, and display ontologies created with Protege-Frames.

== Documentation==

Further documentation about Protege-Frames can be found in the [http://protege.stanford.edu/doc/users.html documentation] section of our Web site, including the popular [http://protege.stanford.edu/publications/ontology_development/ontology101.html Ontology Development 101] guide to building a frame-based ontology, the Protégé-Frames [http://protege.stanford.edu/doc/users_guide/index.html User's Guide], and the [http://protege.stanford.edu/doc/faq.html Protege-Frames FAQ].

== Screenshots ==

View [http://protege.stanford.edu/overview/pf-screenshots.html screenshots] of Protege-Frames.

== Demo Applets ==

View [http://protege.stanford.edu/overview/applets.html applet demos] of Protege-Frames.

== Example Ontologies ==

Browse examples of [http://protege.stanford.edu/download/ontologies.html ontologies] built with Protege-Frames.

</div>