Protege Wiki - User contributions [en]

WebProtegeOpenId

2010-07-16T00:24:42Z

Jack.elliott:

= How to login with Open Id =

Open Id allows you to use an already existing account (like a Google or Yahoo email login) to log into WebProtege. This allows you to use a username and password normally used for webmail (or even looking at pictures, in the case of Flickr) to log into WebProtege.

'''No private information about your external account (passwords or email addresses) is held or even accessed by WebProtege.''' The validation of your account is all done by the external provider, just as it is when normally accessing their site. WebProtege currently supports logins from providers like Google, Yahoo, AOL, Flickr and MySpace.

'''Removing your Open Id account in WebProtege will not delete your Yahoo, Google or any other accounts you hold with other parties.'''

There are two parts to the process; the initial login, which will associate your external account with your WebProtege account, and subsequent logins, which simply use your external account.

__TOC__

== First time ==

'''1.''' Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

'''2.''' Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box. Note that there are more options at the bottom right-hand corner of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

'''3.''' Sign in to your Open Id provider with your '''Open Id''' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

'''4.''' You will now be asked if you already have a WebProtege user account. Click '''yes'''.

[[File:OpenIdFirstTimeStep4.png]]

'''5.''' Sign into WebProtege, as you normally would, providing your username and password.

[[File:OpenIdFirstTimeStep5.png]]

'''6.''' Click on OK to acknowledge the linking of your Open Id account to your WebProtege account.

[[File:OpenIdFirstTimeStep6.png]]

'''7.''' You are now signed into WebProtege, with the account you provided in step '''5'''.

[[File:OpenIdFirstTimeStep7.png]]

== Subsequent attempts ==

'''1.''' Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

'''2.''' Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

'''3.''' Sign in to your Open Id provider with your '''Open Id''' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

'''4.''' You are now signed into the WebProtege account associated with this Open Id login

[[File:OpenIdFirstTimeStep7.png]]

== Removing Open Id from WebProtege ==

'''1.''' Begin by clicking on '''Options -> Edit Profile'''.

'''2.''' You are now looking at the edit profile dialog; you will need to click on the '''Associated OpenId''' link at the bottom of the screen to see all your associated Open Id accounts.

[[File:RemoveOpenIdStep2.png]]

'''3.''' Click on the cross next to any Open Id accounts you want to remove. '''Note that this will not remove any information held by your external provider. Removing your Open Id account in WebProtege will not delete your Yahoo, Google or any other accounts you hold with other parties.'''

[[File:RemoveOpenIdStep3.png]]

'''4.''' The link between your accounts is removed; you may no longer use that Open Id account to log into WebProtege. Click on OK to return to the main screen.

[[File:RemoveOpenIdStep4.png]]

WebProtegeOpenId

2010-07-16T00:23:28Z

Jack.elliott: (checkpoint save)

= How to login with Open Id =

Open Id allows you to use an already existing account (like a Google or Yahoo email login) to log into WebProtege. This allows you to use a username and password normally used for webmail (or even looking at pictures, in the case of Flickr) to log into WebProtege.

'''No private information about your external account (passwords or email addresses) is held or even accessed by WebProtege.''' The validation of your account is all done by the external provider, just as it is when normally accessing their site. WebProtege currently supports logins from providers like Google, Yahoo, AOL, Flickr and MySpace.

There are two parts to the process; the initial login, which will associate your external account with your WebProtege account, and subsequent logins, which simply use your external account.

__TOC__

== First time ==

'''1.''' Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

'''2.''' Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box. Note that there are more options at the bottom right-hand corner of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

'''3.''' Sign in to your Open Id provider with your '''Open Id''' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

'''4.''' You will now be asked if you already have a WebProtege user account. Click '''yes'''.

[[File:OpenIdFirstTimeStep4.png]]

'''5.''' Sign into WebProtege, as you normally would, providing your username and password.

[[File:OpenIdFirstTimeStep5.png]]

'''6.''' Click on OK to acknowledge the linking of your Open Id account to your WebProtege account.

[[File:OpenIdFirstTimeStep6.png]]

'''7.''' You are now signed into WebProtege, with the account you provided in step '''5'''.

[[File:OpenIdFirstTimeStep7.png]]

== Subsequent attempts ==

'''1.''' Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

'''2.''' Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

'''3.''' Sign in to your Open Id provider with your '''Open Id''' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

'''4.''' You are now signed into the WebProtege account associated with this Open Id login

[[File:OpenIdFirstTimeStep7.png]]

== Removing Open Id from WebProtege ==

'''1.''' Begin by clicking on '''Options -> Edit Profile'''.

'''2.''' You are now looking at the edit profile dialog; you will need to click on the '''Associated OpenId''' link at the bottom of the screen to see all your associated Open Id accounts.

[[File:RemoveOpenIdStep2.png]]

'''3.''' Click on the cross next to any Open Id accounts you want to remove. '''Note that this will not remove any information held by your external provider. Removing your Open Id account in WebProtege will not delete your Yahoo, Google or any other accounts you hold with other parties.'''

[[File:RemoveOpenIdStep3.png]]

'''4.''' The link between your accounts is removed; you may no longer use that Open Id account to log into WebProtege. Click on OK to return to the main screen.

[[File:RemoveOpenIdStep4.png]]

File:RemoveOpenIdStep4.png

2010-07-16T00:22:46Z

Jack.elliott:

File:RemoveOpenIdStep3.png

2010-07-16T00:22:33Z

Jack.elliott:

File:RemoveOpenIdStep2.png

2010-07-16T00:22:22Z

Jack.elliott:

WebProtegeOpenId

2010-07-16T00:22:09Z

Jack.elliott: (checkpoint save)

= How to login with Open Id =

Open Id allows you to use an already existing account (like a Google or Yahoo email login) to log into WebProtege. This allows you to use a username and password normally used for webmail (or even looking at pictures, in the case of Flickr) to log into WebProtege.

'''No private information about your external account (passwords or email addresses) is held or even accessed by WebProtege.''' The validation of your account is all done by the external provider, just as it is when normally accessing their site. WebProtege currently supports logins from providers like Google, Yahoo, AOL, Flickr and MySpace.

There are two parts to the process; the initial login, which will associate your external account with your WebProtege account, and subsequent logins, which simply use your external account.

__TOC__

== First time ==

'''1.''' Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

'''2.''' Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box. Note that there are more options at the bottom right-hand corner of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

'''3.''' Sign in to your Open Id provider with your '''Open Id''' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

'''4.''' You will now be asked if you already have a WebProtege user account. Click '''yes'''.

[[File:OpenIdFirstTimeStep4.png]]

'''5.''' Sign into WebProtege, as you normally would, providing your username and password.

[[File:OpenIdFirstTimeStep5.png]]

'''6.''' Click on OK to acknowledge the linking of your Open Id account to your WebProtege account.

[[File:OpenIdFirstTimeStep6.png]]

'''7.''' You are now signed into WebProtege, with the account you provided in step '''5'''.

[[File:OpenIdFirstTimeStep7.png]]

== Subsequent attempts ==

'''1.''' Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

'''2.''' Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

'''3.''' Sign in to your Open Id provider with your '''Open Id''' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

'''4.''' You are now signed into the WebProtege account associated with this Open Id login

[[File:OpenIdFirstTimeStep7.png]]

== Removing Open Id from WebProtege ==

'''1.''' Begin by clicking on '''Options -> Edit Profile'''.

'''2.''' You are now looking at the edit profile dialog; you will need to click on the '''Associated OpenId''' link at the bottom of the screen to see all your associated Open Id accounts.

[[File:OpenIdFirstTimeStep7.png]]

'''3.''' Click on the cross next to any Open Id accounts you want to remove. '''Note that this will not remove any information held by your external provider. Removing your Open Id account in WebProtege will not delete your Yahoo, Google or any other accounts you hold with other parties.'''

[[File:OpenIdFirstTimeStep7.png]]

'''4.''' The link between your accounts is removed; you may no longer use that Open Id account to log into WebProtege. Click on OK to return to the main screen.

[[File:OpenIdFirstTimeStep7.png]]

WebProtegeOpenId

2010-07-15T23:57:48Z

Jack.elliott: (checkpoint save)

WebProtegeOpenId

2010-07-15T23:51:54Z

Jack.elliott: /* First time */ (checkpoint save)

WebProtegeOpenId

2010-07-15T23:50:47Z

Jack.elliott:

WebProtegeOpenId

2010-07-15T23:49:03Z

Jack.elliott: /* How to login with Open Id */ (checkpoint save)

WebProtegeOpenId

2010-07-15T23:47:54Z

Jack.elliott:

= How to login with Open Id =

Open Id allows you to use an already existing account (like a Google or Yahoo email login) to log into WebProtege. This allows you to use a username and password that is normally used for webmail to log into WebProtege.

'''No private information about your external account (passwords or email addresses) is held or even accessed by WebProtege.''' The validation of your account is all done by the external provider.

__TOC__

== First time ==

'''1.''' Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

'''2.''' Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box. Note that there are more options at the bottom right-hand corner of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

'''3.''' Sign in to your Open Id provider with your '''Open Id''' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

'''4.''' You will now be asked if you already have a WebProtege user account. Click '''yes'''.

[[File:OpenIdFirstTimeStep4.png]]

'''5.''' Sign into WebProtege, as you normally would, providing your username and password.

[[File:OpenIdFirstTimeStep5.png]]

'''6.''' Click on OK to acknowledge the linking of your Open Id account to your WebProtege account.

[[File:OpenIdFirstTimeStep6.png]]

'''7.''' You are now signed into WebProtege, with the account you provided in step 5.

[[File:OpenIdFirstTimeStep7.png]]

== Subsequent attempts ==

'''1.''' Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

'''2.''' Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

'''3.''' Sign in to your Open Id provider with your '''Open Id''' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

'''4.''' You are now signed into the WebProtege account associated with this Open Id login

[[File:OpenIdFirstTimeStep7.png]]

WebProtegeOpenId

2010-07-15T23:47:09Z

Jack.elliott: (checkpoint save)

= How to login with Open Id =

Open Id allows you to use an already existing account (like a Google or Yahoo email login) to log into WebProtege. This allows you to use a username and password that is normally used for webmail to log into WebProtege.

'''No private information about your external account (passwords or email addresses) is held or even accessed by WebProtege.''' The validation of your account is all done by the external provider.

__TOC__

== First time ==

'''1.''' Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

'''2.''' Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box. Note that there are more options at the bottom right-hand corner of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

'''3.''' Sign in to your Open Id provider with your '''Open Id''' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

'''4.''' You will now be asked if you already have a WebProtege user account. Click '''yes'''.

[[File:OpenIdFirstTimeStep4.png]]

'''5.''' Sign into WebProtege, as you normally would, providing your username and password.

[[File:OpenIdFirstTimeStep5.png]]

'''6.''' Click on OK to acknowledge the linking of your Open Id account to your WebProtege account.

[[File:OpenIdFirstTimeStep6.png]]

'''7.''' You are now signed into WebProtege, with the account you provided in step 5.

[[File:OpenIdFirstTimeStep7.png]]

== Subsequent attempts ==

'''1.''' Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

'''2.''' Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

'''3.''' Sign in to your Open Id provider with your ''Open Id'' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

'''4.''' You are now signed into the WebProtege account associated with this Open Id login

[[File:OpenIdFirstTimeStep7.png]]

WebProtegeOpenId

2010-07-15T23:42:38Z

Jack.elliott: (checkpoint save)

= How to login with Open Id =

Open Id allows you to use an already existing account (like a Google or Yahoo email login) to log into WebProtege. This allows you to use a username and password that is normally used for webmail to log into WebProtege.

'''No private information about your external account (passwords or email addresses) is held or even accessed by WebProtege.''' The validation of your account is all done by the external provider.

__TOC__

== First time ==

1. Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

2. Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

3. Sign in to your Open Id provider with your ''Open Id'' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

4. You will now be asked if you already have a WebProtege user account. Click yes.

[[File:OpenIdFirstTimeStep4.png]]

5. Sign into WebProtege, as you normally would, providing your username and password.

[[File:OpenIdFirstTimeStep5.png]]

6. Click on OK to acknowledge the linking of your Open Id account to your WebProtege account.

[[File:OpenIdFirstTimeStep6.png]]

7. You are now signed into WebProtege, with the account you provided in step 5.

[[File:OpenIdFirstTimeStep7.png]]

== Subsequent attempts ==

1. Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

2. Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

3. Sign in to your Open Id provider with your ''Open Id'' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

4. You are now signed into the WebProtege account associated with this Open Id login

[[File:OpenIdFirstTimeStep7.png]]

WebProtegeOpenId

2010-07-15T23:42:25Z

Jack.elliott: (checkpoint save)

= How to login with Open Id =

Open Id allows you to use an already existing account (like a Google or Yahoo email login) to log into WebProtege. This allows you to use a username and password that is normally used for webmail to log into WebProtege.

''No private information about your external account (passwords or email addresses) is held or even accessed by WebProtege.'' The validation of your account is all done by the external provider.

__TOC__

== First time ==

1. Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

2. Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

3. Sign in to your Open Id provider with your ''Open Id'' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

4. You will now be asked if you already have a WebProtege user account. Click yes.

[[File:OpenIdFirstTimeStep4.png]]

5. Sign into WebProtege, as you normally would, providing your username and password.

[[File:OpenIdFirstTimeStep5.png]]

6. Click on OK to acknowledge the linking of your Open Id account to your WebProtege account.

[[File:OpenIdFirstTimeStep6.png]]

7. You are now signed into WebProtege, with the account you provided in step 5.

[[File:OpenIdFirstTimeStep7.png]]

== Subsequent attempts ==

1. Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

2. Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

3. Sign in to your Open Id provider with your ''Open Id'' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

4. You are now signed into the WebProtege account associated with this Open Id login

[[File:OpenIdFirstTimeStep7.png]]

WebProtegeOpenId

2010-07-15T23:40:55Z

Jack.elliott: (checkpoint save)

= How to login with Open Id =

Open Id allows you to use an existing account hosted by an external entity (Google or Yahoo are popular) to log into WebProtege. This allows you to use a username and password that is normally used for webmail to log into WebProtege.

Note that no private information about your external account (passwords or email addresses) is held or even accessed by WebProtege. The validation of your account is all done online.

__TOC__

== First time ==

1. Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

2. Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

3. Sign in to your Open Id provider with your ''Open Id'' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

4. You will now be asked if you already have a WebProtege user account. Click yes.

[[File:OpenIdFirstTimeStep4.png]]

5. Sign into WebProtege, as you normally would, providing your username and password.

[[File:OpenIdFirstTimeStep5.png]]

6. Click on OK to acknowledge the linking of your Open Id account to your WebProtege account.

[[File:OpenIdFirstTimeStep6.png]]

7. You are now signed into WebProtege, with the account you provided in step 5.

[[File:OpenIdFirstTimeStep7.png]]

== Subsequent attempts ==

1. Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

2. Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

3. Sign in to your Open Id provider with your ''Open Id'' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

4. You are now signed into the WebProtege account associated with this Open Id login

[[File:OpenIdFirstTimeStep7.png]]

WebProtegeOpenId

2010-07-15T23:33:01Z

Jack.elliott: (checkpoint save)

== How to login with Open Id ==

__TOC__

=== First time ===

1. Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

2. Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

3. Sign in to your Open Id provider with your ''Open Id'' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

4. You will now be asked if you already have a WebProtege user account. Click yes.

[[File:OpenIdFirstTimeStep4.png]]

5. Sign into WebProtege, as you normally would, providing your username and password.

[[File:OpenIdFirstTimeStep5.png]]

6. Click on OK to acknowledge the linking of your Open Id account to your WebProtege account.

[[File:OpenIdFirstTimeStep6.png]]

7. You are now signed into WebProtege, with the account you provided in step 5.

[[File:OpenIdFirstTimeStep7.png]]

=== Subsequent attempts ===

1. Click on the sign in link at the top right-hand corner of the screen.

[[File:OpenIdFirstTimeStep1.png]]

2. Select your Open Id provider (Google, Yahoo etc) from the list at the bottom of the dialog box.

[[File:OpenIdFirstTimeStep2.png]]

3. Sign in to your Open Id provider with your ''Open Id'' sign in (GMail username, Yahoo userid etc).

[[File:OpenIdFirstTimeStep3.png]]

4. You are now signed into the WebProtege account associated with this Open Id login

[[File:OpenIdFirstTimeStep7.png]]

WebProtegeNotifications

2010-07-15T23:31:10Z

Jack.elliott: (checkpoint save)

= WebProtege Notifications =

__TOC__

== Introduction to WebProtege Notifications ==

* It's important to note that WebProtege distinguishes between two types of changes - '''ontology changes and note changes'''. Ontology changes are additions to trees, or changes in properties. Note changes are only made when someone adds a new note or replies to an existing one. The notification delay for each of these can be configured independently.
* WebProtege supports several types of interval:
** '''Immediately''' means you will be notified every few minutes of changes to entities or branches you are [[WebProtegeWatches|watching]].
** '''Hourly''' means you will be notified every hour of changes to entities or branches you are [[WebProtegeWatches|watching]].
** '''Daily''' means you will be notified once every day of changes to entities or branches you are [[WebProtegeWatches|watching]].

== Using WebProtege Notifications ==

1. Notifications allow you to configure WebProtege's email notification system. Here you can set your email address and the interval between emails. Begin by signing onto WebProtege.

2. Click on the options link and select Edit Profile.

[[File:WebProtegeNotificationsStep2.png]]

3. You are now in the Edit Profile screen. Here you can select the notification interval and your email address.

[[File:WebProtegeNotificationsStep3.png]]

4. Before you can start receiving notification of changes to WebProtege, you will need to enter your email address here.

[[File:WebProtegeNotificationsStep4.png]]

5. Select your ontology notification period here. WebProtege will inform you of any changes to the ontology (not related to notes) on your watched entities or branches after this period has elapsed.

[[File:WebProtegeNotificationsStep5.png]]

6. Select your note notification period here. WebProtege will inform you of changes to the notes on your watched entities or branches after this period has elapsed.

[[File:WebProtegeNotificationsStep6.png]]

7. When you're ready, click on the OK button.

8. You are presented with a success dialog box, indicating your changes have been saved. Click OK to proceed.

[[File:WebProtegeNotificationsStep8.png]]

9. Your notifications are now configured, and you're ready to receive notifications of changes to your watched items.

10. If your notifications are complete, and your [[WebProtegeWatches|watches]] are set, you can expect to see an email like the one below after changes are made to your watched entities.

[[File:WebProtegeNotificationEmail.png]]

WebProtegeNotifications

2010-07-15T22:46:22Z

Jack.elliott: (checkpoint save)

= WebProtege Notifications =

== Introduction to WebProtege Notifications ==

* It's important to note that WebProtege distinguishes between two types of changes - '''ontology changes and note changes'''. Ontology changes are additions to trees, or changes in properties. Note changes are only made when someone adds a new note or replies to an existing one. The notification delay for each of these can be configured independently.
* WebProtege supports several types of interval:
** '''Immediately''' means you will be notified every few minutes of changes to entities or branches you are [[WebProtegeWatches|watching]].
** '''Hourly''' means you will be notified every hour of changes to entities or branches you are [[WebProtegeWatches|watching]].
** '''Daily''' means you will be notified once every day of changes to entities or branches you are [[WebProtegeWatches|watching]].

== Using WebProtege Notifications ==

1. Notifications allow you to configure WebProtege's email notification system. Here you can set your email address and the interval between emails. Begin by signing onto WebProtege.

2. Click on the options link and select Edit Profile.

[[File:WebProtegeNotificationsStep2.png]]

3. You are now in the Edit Profile screen. Here you can select the notification interval and your email address.

[[File:WebProtegeNotificationsStep3.png]]

4. Before you can start receiving notification of changes to WebProtege, you will need to enter your email address here.

[[File:WebProtegeNotificationsStep4.png]]

5. Select your ontology notification period here. WebProtege will inform you of any changes to the ontology (not related to notes) on your watched entities or branches after this period has elapsed.

[[File:WebProtegeNotificationsStep5.png]]

6. Select your note notification period here. WebProtege will inform you of changes to the notes on your watched entities or branches after this period has elapsed.

[[File:WebProtegeNotificationsStep6.png]]

7. When you're ready, click on the OK button.

8. You are presented with a success dialog box, indicating your changes have been saved. Click OK to proceed.

[[File:WebProtegeNotificationsStep8.png]]

9. Your notifications are now configured, and you're ready to receive notifications of changes to your watched items.

10. If your notifications are complete, and your [[WebProtegeWatches|watches]] are set, you can expect to see an email like the one below after changes are made to your watched entities.

[[File:WebProtegeNotificationEmail.png]]

WebProtegeNotifications

2010-07-15T22:45:19Z

Jack.elliott: (checkpoint save)

= WebProtege Notifications =

== Introduction to WebProtege Notifications ==

* It's important to note that WebProtege distinguishes between two types of changes - '''ontology changes and note changes'''. Ontology changes are additions to trees, or changes in properties. Note changes are only made when someone adds a new note or replies to an existing one. The notification delay for each of these can be configured independently.
* WebProtege supports several types of interval:
** '''Immediately''' means you will be notified every few minutes of changes to entities or branches you are [[WebProtegeWatches|watching]].
** '''Hourly''' means you will be notified every hour of changes to entities or branches you are [[WebProtegeWatches|watching]].
** '''Daily''' means you will be notified once every day of changes to entities or branches you are [[WebProtegeWatches|watching]].

== Using WebProtege Notifications ==

1. Notifications allow you to configure WebProtege's email notification system. Here you can set your email address and the interval between emails. Begin by signing onto WebProtege.

2. Click on the options link and select Edit Profile.

[[File:WebProtegeNotificationsStep2.png]]

3. You are now in the Edit Profile screen. Here you can select the notification interval and your email address.

[[File:WebProtegeNotificationsStep3.png]]

4. Before you can start receiving notification of changes to WebProtege, you will need to enter your email address here.

[[File:WebProtegeNotificationsStep4.png]]

5. Select your ontology notification period here. WebProtege will inform you of any changes to the ontology (not related to notes) on your watched entities or branches after this period has elapsed.

[[File:WebProtegeNotificationsStep5.png]]

6. Select your note notification period here. WebProtege will inform you of changes to the notes on your watched entities or branches after this period has elapsed.

[[File:WebProtegeNotificationsStep6.png]]

7. When you're ready, click on the OK button.

8. You are presented with a success dialog box, indicating your changes have been saved. Click OK to proceed.

[[File:WebProtegeNotificationsStep8.png]]

9. Your notifications are now configured, and you're ready to receive notifications of changes to your watched items.

10. If your notifications are complete, and your [http://protegewiki.stanford.edu/wiki/WebProtegeWatches|watches] are set, you can expect to see an email like the one below after changes are made to your watched entities.

[[File:WebProtegeNotificationEmail.png]]

File:WebProtegeNotificationEmail.png

2010-07-15T22:44:17Z

Jack.elliott:

WebProtegeWatches

2010-07-15T19:50:52Z

Jack.elliott:

= WebProtege Watches =

__TOC__

== Using WebProtege Watches ==

=== Setting up a watch ===

1. Setting a watch on an item in the tree will notify you any time the entity you are watching (but not its children) changes. Begin by signing into WebProtege.

2. Browse to the ICD Content tab

3. Select an item in the tree.

[[File:WatchesEntityWatchesStep3.png]]

4. Click on the arrow beside the watch button at the top of the panel.

[[File:WatchesEntityWatchesStep4.png]]

5. Notice that watch is currently selected.

6. Select watch again, closing the menu.

7. Click on the watch button to set your watch. A symbol of a tag appears beside all the items you are watching in the tree.

[[File:WatchesEntityWatchesStep7.png]]

8. If your [[WebProtegeNotifications|notifications]] are set, any change to the entity will cause an email to be sent, with links to the original application.

=== Setting up a branch watch ===
1. Setting a branch watch on an item in the tree will notify you of changes to an entity and its children. Begin by signing into WebProtege.

2. Browse to the ICD Content tab.

3. Select an item in the tree, preferably something with lots of children.

[[File:WatchesEntityWatchesStep3.png]]

4. Click on the arrow beside the watch button at the top of the panel.

[[File:WatchesEntityWatchesStep4.png]]

5. Watch should be selected.

6. Select Branch Watch, closing the menu.

7. The Watch button should now be labelled Watch Branch. Click on the Watch Branch Button to set your watch. A tag symbol with a plus appears beside all items you are watching in the tree.

[[File:WatchesBranchWatchesStep7.png]]

8. If your [[WebProtegeNotifications|notifications]] are set, any change to the entity or its children will cause an email to be sent, with links to the original application.
=== Removing a watch or a branch watch ===
1. Select any item that has a watch or a branch watch already set. The Watch button will change its text to Unset Watch.

[[File:WatchesRemoveWatchesStep1.png]]

2. Click on the Remove Watch Button.

3. The watch should now be removed, and all symbols of tags, and tags with pluses beside the entity are removed.

[[File:WatchesRemoveWatchesStep3.png]]

File:WatchesRemoveWatchesStep1.png

2010-07-15T19:49:31Z

Jack.elliott: uploaded a new version of "File:WatchesRemoveWatchesStep1.png"

File:WatchesBranchWatchesStep7.png

2010-07-15T19:48:41Z

Jack.elliott: uploaded a new version of "File:WatchesBranchWatchesStep7.png"

File:WatchesEntityWatchesStep7.png

2010-07-15T19:47:09Z

Jack.elliott: uploaded a new version of "File:WatchesEntityWatchesStep7.png"

File:WatchesRemoveWatchesStep1.png

2010-07-15T19:43:03Z

Jack.elliott: uploaded a new version of "File:WatchesRemoveWatchesStep1.png": Reverted to version as of 19:41, July 15, 2010

File:WatchesRemoveWatchesStep1.png

2010-07-15T19:42:47Z

Jack.elliott: uploaded a new version of "File:WatchesRemoveWatchesStep1.png"

File:WatchesRemoveWatchesStep1.png

2010-07-15T19:41:53Z

Jack.elliott: uploaded a new version of "File:WatchesRemoveWatchesStep1.png"

WebProtegeWatches

2010-07-15T19:40:28Z

Jack.elliott: (checkpoint save)

= WebProtege Watches =

__TOC__

== Using WebProtege Watches ==

=== Setting up a watch ===

1. Setting a watch on an item in the tree will notify you any time the entity you are watching (but not its children) changes. Begin by signing into WebProtege.

2. Browse to the ICD Content tab

3. Select an item in the tree.

[[File:WatchesEntityWatchesStep3.png]]

4. Click on the arrow beside the watch button at the top of the panel.

[[File:WatchesEntityWatchesStep4.png]]

5. Notice that watch is currently selected.

6. Select watch again, closing the menu.

7. Click on the watch button to set your watch. A symbol of a tag appears beside all the items you are watching in the tree.

[[File:WatchesEntityWatchesStep7.png]]

8. If your [[WebProtegeNotifications|notifications]] are set, any change to the entity will cause an email to be sent, with links to the original application.

=== Setting up a branch watch ===
1. Setting a branch watch on an item in the tree will notify you of changes to an entity and its children. Begin by signing into WebProtege.

2. Browse to the ICD Content tab.

3. Select an item in the tree, preferably something with lots of children.

[[File:WatchesEntityWatchesStep3.png]]

4. Click on the arrow beside the watch button at the top of the panel.

[[File:WatchesEntityWatchesStep4.png]]

5. Watch should be selected.

6. Select Branch Watch, closing the menu.

7. The Watch button should now be labelled Watch Branch. Click on the Watch Branch Button to set your watch. A (BW) symbol appears beside all items you are watching in the tree.

[[File:WatchesBranchWatchesStep7.png]]

8. If your [[WebProtegeNotifications|notifications]] are set, any change to the entity or its children will cause an email to be sent, with links to the original application.
=== Removing a watch or a branch watch ===
1. Select any item that has a watch or a branch watch already set. The Watch button should change its text to Unset Watch.

[[File:WatchesRemoveWatchesStep1.png]]

2. Click on the Remove Watch Button.

3. The watch should now be removed, and all symbols (W), (BW) beside the entity are removed.

[[File:WatchesRemoveWatchesStep3.png]]

File:WatchesRemoveWatchesStep1.png

2010-07-15T19:40:17Z

Jack.elliott: uploaded a new version of "File:WatchesRemoveWatchesStep1.png"

File:WatchesEntityWatchesStep7.png

2010-07-15T19:39:59Z

Jack.elliott: uploaded a new version of "File:WatchesEntityWatchesStep7.png"

File:WatchesBranchWatchesStep7.png

2010-07-15T19:39:32Z

Jack.elliott: uploaded a new version of "File:WatchesBranchWatchesStep7.png"

ICatLinearization

2010-07-15T18:09:19Z

Jack.elliott: (checkpoint save)

=== iCat Linearization ===
== Overview ==
* Linearization in iCat allows the same entity to be a child of two parents, but only counted as a child of one parent for particular purposes.
* For example, Bacterial Pneumonia is both an infection and a respiratory disease. The same code can be used to describe this disease, but have different parents depending on whether the same code could be used for a particular disease, but have different parents depending on if it is entered for the purpose of morbidity or for mortality.
* This directly affects the way in which statistics are aggregated under particular categories. In some cases (say a classification of morbidity) we might want to classify Bacterial Pneumonia as a disease. In that case, all incidents of Bacterial Pneumonia add one count to the tally of all diseases. If we were more interested in infections, then each case of Bacterial Pneumonia could be counted as an infection.

== Using Linearization in iCat ==
1. Begin by signing in to iCat.

2. Now go to the ICD Content tab and browse to a category you would like to add another parent to.

[[File:WebProtegeLinearizationStep2.png]]

3. Click on the Classification Properties tab in the group next to the main panel.

[[File:WebProtegeLinearizationStep3.png]]

4. Select the use of the Linearization by selecting that row in the bottom table. Note that here we have selected Research as our 'type' of linearization.

[[File:WebProtegeLinearizationStep4.png]]

5. Now add the new parent by clicking on the Linearization Parent cell next to your selection. This will bring up a window allowing you to select the parent.

[[File:WebProtegeLinearizationStep5.png]]

6. Select the new parent in this tree view by browsing to it and clicking select. Here we have selected code B98 as our parent for research purposes.

[[File:WebProtegeLinearizationStep6.png]]

7. The category now has a new parent category for research purposes.

[[File:WebProtegeLinearizationStep7.png]]

File:WebProtegeLinearizationStep5.png

2010-07-15T18:06:28Z

Jack.elliott: uploaded a new version of "File:WebProtegeLinearizationStep5.png": Reverted to version as of 18:04, July 15, 2010

File:WebProtegeLinearizationStep5.png

2010-07-15T18:06:04Z

Jack.elliott: uploaded a new version of "File:WebProtegeLinearizationStep5.png": Reverted to version as of 17:43, July 15, 2010

File:WebProtegeLinearizationStep5.png

2010-07-15T18:04:57Z

Jack.elliott: uploaded a new version of "File:WebProtegeLinearizationStep5.png"

File:WebProtegeLinearizationStep6.png

2010-07-15T18:03:16Z

Jack.elliott: uploaded a new version of "File:WebProtegeLinearizationStep6.png": Reverted to version as of 18:01, July 15, 2010

File:WebProtegeLinearizationStep6.png

2010-07-15T18:02:48Z

Jack.elliott: uploaded a new version of "File:WebProtegeLinearizationStep6.png": Reverted to version as of 18:01, July 15, 2010

File:WebProtegeLinearizationStep6.png

2010-07-15T18:02:09Z

Jack.elliott: uploaded a new version of "File:WebProtegeLinearizationStep6.png"

File:WebProtegeLinearizationStep6.png

2010-07-15T18:01:35Z

Jack.elliott: uploaded a new version of "File:WebProtegeLinearizationStep6.png"

File:WebProtegeLinearizationStep6.png

2010-07-15T18:00:07Z

Jack.elliott: uploaded a new version of "File:WebProtegeLinearizationStep6.png"

File:WebProtegeLinearizationStep6.png

2010-07-15T17:58:57Z

Jack.elliott: uploaded a new version of "File:WebProtegeLinearizationStep6.png"

File:WebProtegeLinearizationStep6.png

2010-07-15T17:58:30Z

Jack.elliott: uploaded a new version of "File:WebProtegeLinearizationStep6.png"

File:WebProtegeLinearizationStep6.png

2010-07-15T17:57:18Z

Jack.elliott: uploaded a new version of "File:WebProtegeLinearizationStep6.png"

File:WebProtegeLinearizationStep4.png

2010-07-15T17:47:03Z

Jack.elliott:

ICatLinearization

2010-07-15T17:46:32Z

Jack.elliott: (checkpoint save)

=== iCat Linearization ===
== Overview ==
* Linearization in iCat allows the same entity to be a child of two parents, but only counted as a child of one parent for particular purposes.
* For example, Bacterial Pneumonia is both an infection and a respiratory disease. The same code can be used to describe this disease, but have different parents depending on whether the same code could be used for a particular disease, but have different parents depending on if it is entered for the purpose of morbidity or for mortality.
* This directly affects the way in which statistics are aggregated under particular categories. In some cases (say a classification of morbidity) we might want to classify Bacterial Pneumonia as a disease. In that case, all incidents of Bacterial Pneumonia add one count to the tally of all diseases. If we were more interested in infections, then each case of Bacterial Pneumonia could be counted as an infection.

== Using Linearization in iCat ==
1. Begin by signing in to iCat.

2. Now go to the ICD Content tab and browse to a category you would like to add another parent to.

[[File:WebProtegeLinearizationStep2.png]]

3. Click on the Classification Properties tab in the group next to the main panel.

[[File:WebProtegeLinearizationStep3.png]]

4. Select the use of the Linearization by selecting that row in the bottom table. Note that here we have selected Research as our 'type' of linearization.

[[File:WebProtegeLinearizationStep4.png]]

5. Now add the new parent by clicking on the Linearization Parent cell next to your selection. This will bring up a window allowing you to select the parent.

[[File:WebProtegeLinearizationStep5.png]]

6. Select the new parent in this tree view by browsing to it and clicking select. Here we have selected code B98 as our parent for research purposes.

[[File:WebProtegeLinearizationStep6.png]]

7. The category now has a new parent category for research purposes.

[[File:WebProtegeLinearizationStep7.png]]

[[File:WebProtegeLinearizationHoldingScreenshot.png]]

File:WebProtegeLinearizationStep7.png

2010-07-15T17:44:18Z

Jack.elliott:

File:WebProtegeLinearizationStep6.png

2010-07-15T17:43:59Z

Jack.elliott:

File:WebProtegeLinearizationStep5.png

2010-07-15T17:43:36Z

Jack.elliott:

File:WebProtegeLinearizationStep3.png

2010-07-15T17:43:22Z

Jack.elliott:

File:WebProtegeLinearizationStep2.png

2010-07-15T17:43:07Z

Jack.elliott: